Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0320 ATGCAATCGCCTATTGATTTGTTGAATGAAAGGGTTGAAATTGTGTCCCATTTAGGGGACCTTCAAATCAAATACCATCCCTCCAATGCCACTCTCCACAACAGGGGTCATGATATCCAGTTGGAATGGGTAGCCGGCGCAGGCTATCTTGAAATTAATGGAAGTCGGTATGTGCTCAAAAAGTGTCACTGGCATTCTTCTTCCGAGCACACCATCTATGGCAAAAGGTTTGATCTAGAATTACACATGGTGCATGAAACTGAAGCAGGCGAAACAGCCGTGATTGGAATCCTTTACAAGATTGGAAAACCAGATGCTTTCTTGACATCGTTAATGGATCATTTAGAGGCTCTTTCTGATAAAACAGACGCAGAAGAAGTAGTGGGTACTGTGGATCCTTCCCACATTAAAATTAGCAGCTTGCAATATTACAGATACATGGGTTCTCTCACTACTCCTCCTTGTACTGAAAACGTTGTTTGGACCATTCTTAGacagGTGAGAACTGTTTCAAAGAAACAAGTCGATTTGCTTCGAGTTGCTGTTCATGatTACTTTATCCCAGCGAGAAGATCAGGAGAAAGACATGAAATTGAAgagcctctcattggtgataaGGCAATGGAGGAAGTTGTAGGAGTCAAAGAACCTGCGATGTACAAACTGATCGGGGCCGTTGTTCTTTGTGTCTTTGCCACGGGTCTTGTGGGAAGAAACCCAGAAGTTGGAGCTGGAGAAGATTCTGGAATGTCAAAAAGAGTGATTGGAGGACCATTGCTTAATGGGATCAAGACAGTTGTTTCTGGAAACAGAGTTGAGAATTGA 825 0.4158 MQSPIDLLNERVEIVSHLGDLQIKYHPSNATLHNRGHDIQLEWVAGAGYLEINGSRYVLKKCHWHSSSEHTIYGKRFDLELHMVHETEAGETAVIGILYKIGKPDAFLTSLMDHLEALSDKTDAEEVVGTVDPSHIKISSLQYYRYMGSLTTPPCTENVVWTILRQVRTVSKKQVDLLRVAVHDYFIPARRSGERHEIEEPLIGDKAMEEVVGVKEPAMYKLIGAVVLCVFATGLVGRNPEVGAGEDSGMSKRVIGGPLLNGIKTVVSGNRVEN 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0320 274 ProSiteProfiles Alpha-carbonic anhydrases profile. 1 212 IPR001148 -
Sto12g0320 274 SMART Carb_anhydrase_2a 1 198 IPR001148 -
Sto12g0320 274 PANTHER CARBONIC ANHYDRASE 1 186 IPR023561 GO:0004089|GO:0008270
Sto12g0320 274 CDD alpha_CA_prokaryotic_like 1 183 IPR041891 -
Sto12g0320 274 PANTHER BIFUNCTIONAL MONODEHYDROASCORBATE REDUCTASE AND CARBONIC ANHYDRASE NECTARIN-3 1 186 - -
Sto12g0320 274 SUPERFAMILY Carbonic anhydrase 1 182 IPR036398 -
Sto12g0320 274 Pfam Eukaryotic-type carbonic anhydrase 2 180 IPR001148 -
Sto12g0320 274 ProSitePatterns Alpha-carbonic anhydrases signature. 68 84 IPR018338 GO:0004089|GO:0008270
Sto12g0320 274 Gene3D Alpha carbonic anhydrase 1 198 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0320 Sto-Chr12 1973640 1979028 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0320 K01674 - gmx:100810249 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0320 12 1973640 1979028 Sto12g0320 12 1973640 1979028 ECH