Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0313 ATGGCCGGAAAAGCTGCAGCGACTACGACGACATACTCGCCGTCACCGACCACGCAGAAAACCAAAGCGCCTATATTTCAGGAGGATTGGGTCCGACCCGATGGCCGCGGCTTCCATCAGTGCAGGCCAGCCTTTTTCAGAACCGGTGCTGTGAATGCTGCCTCTGGATCTGCTTATGCAGAGTTTGGAAATACCAAGGTCATTGTATCTGTATTTGGGCCAAGAGAGAGTAAGAAGGCAATGATGTACAGTGATATAGGGCGTCTAAATTGCAATGTAAGCTTTACAACATTTGCTACTCCAGTCCGTGGTCAGGGATCGGACCACAAAGAGTACACTGCAATGCTTCATAAAGCTTTAGAGGGCTCGATAATGTTGGAATCCGGAGGCAGTGATCTCCCAGTTGTCATATCTTGTGCTAGCCTAGCCCTAGCAGATGCTGGAATAATGATGTACGACCTTGTTACCTCAGTTTCTGTGTCTTGTCTCAGTAAGAACCTTGTCATTGATCCTATTTCGGAGGAGGAAAAGTGCCAAGATGGAAGCTTAATGATAACTTGCATGCCTTCTCGTTACGAAGTCACCCAACTCACTGTTACTGGGGAATGGTCCACCCCCAAACTTAATGAGGGAATGCAGCTGTGTCTAGATGCTTGTGCAGAGCTTGCAAAGATCATGAGGTCATGTTTGAAAGAAGTTGCTTCAGTTTCACAAGAATAG 720 0.4722 MAGKAAATTTTYSPSPTTQKTKAPIFQEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSFTTFATPVRGQGSDHKEYTAMLHKALEGSIMLESGGSDLPVVISCASLALADAGIMMYDLVTSVSVSCLSKNLVIDPISEEEKCQDGSLMITCMPSRYEVTQLTVTGEWSTPKLNEGMQLCLDACAELAKIMRSCLKEVASVSQE 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0313 239 Gene3D - 18 237 IPR027408 -
Sto12g0313 239 SUPERFAMILY Ribonuclease PH domain 2-like 151 232 IPR036345 -
Sto12g0313 239 Pfam 3' exoribonuclease family, domain 1 40 141 IPR001247 -
Sto12g0313 239 PANTHER EXOSOME COMPLEX COMPONENT MTR3 17 233 - -
Sto12g0313 239 PANTHER EXOSOME COMPLEX COMPONENT 17 233 - -
Sto12g0313 239 SUPERFAMILY Ribosomal protein S5 domain 2-like 27 180 IPR020568 -
Sto12g0313 239 MobiDBLite consensus disorder prediction 1 23 - -
Sto12g0313 239 CDD RNase_PH_MTR3 41 232 - -
Sto12g0313 239 Pfam 3' exoribonuclease family, domain 2 153 214 IPR015847 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0313 Sto-Chr12 1920440 1923892 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0313 K12587 - gmx:100819105 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0313 12 1920440 1923892 Sto12g0313 12 1920440 1923892 ECH