Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0311 ATGGGTTTTGGTCGGAATTCAACATCGAGAAGTGGGGACTACTTGGAAGGGATGATCAATGAGTATGTTGGAGGAAAGGCCAAAATGAAGCCTCAAAGAAGTGGGTCTGCTAAGCTTGTGGCTTCTCTCACATGTCTTCAATTTTTCTTTGCCATTTATGCAACTTTCTTGCTCTACTATATGAGCCCCACTATAGATTTACGATCCAAACCCGATTTTACTTGGGCTACCCGAATCGCCCAACAGTGGAGGCATCTTATGGTCACACCCCACGTATTGGGTCGATACCAAGAAGCTTCTTCTCTCATTAGAGAGGACATTCAAGCCCAACCCATTACTCCATCTGAAGTCTGCGAGCATGAGAAGATAGATTTTATGCAGAAAAAGTCTAATGATGTCCAAATGATTAAGTTGAAGACAGAGCTTTACAAAGAGGTGTTGGAGTTCCAAAGCAGAAGCATTGGCATTGAGACTCTTGCTGAGCTAATGGCAATGAAGTCCAAGTGGGACTTGAAGGGTCCAAACAAACCCAAAATCACAGTCATACTGAACCATTTCAAGAGAAAGACTTTGTGTGCTCAGATAGACTCATTGCTTGAGCAGACCCTCCCATTCCACCATGTTTGGGTGCTTTCATTTGGGAGCCCGAATGAGGTGTCACTAAGGAGAATCGTAGAGAGTTATAACAATTCAAGGATCAGCTTCATAAGCTCTGGTTATGATTTCAAGTACTATGGAAGGTTCCAAATGGCTCTTCAGACAGAGGGTGATCTTGTGTACATAGTTGATGATGACATGATACCTGGGAGGAAGATGCTGCAGATTTTGGCACATGTGGCTGGGACAGACAAGTACAAGAACTCTGTTTTGGGAAGCATAGGAAGGATATTGCCTTTCAGACAGAAGGACTTTACATTCCCAAGTTACAGAAAATTCAGGTCTAAGGAAGCAGGCTTGTATTTGCCTGATCCTGCGTATGATATTACAGTTGATAAAATTGTGCAGGTGGATTTCTTGTCCAGCTCTTGGTTTTTATCTGCTGACCTTGTCAAAACTCTCTTCATTGAGACACCTTTTACCTTCGCAACCGGGGAAGATCTCCACCTCAGCTATCAGCTTCAGAAGTACAGAAATGCTGGGTCTTTTGTTCTTCCAGTTGACCCAAACGACAAAGAAACTTGGGGTGATAGTGAACACAGGCTTGCATATGTCTCAGAAACTACTGTCATCTTCAAGGACATTGTTCAAGTCCGAGATGATCAATGGTGGAAAGCACTTTCTACAGGTTATATGACCCAGTGGGCTGCAATGTACCCTCAGAAAATAGATGCACTCTTTTACGCTCACTCTCTGGATGAAGTTAAAGCACTCGCACCTCTTCTTGACAAGTTCAGGTCCACAGTGGGCAAGAAGGCCTACGTTGTTGTTTCTGGAACCAATTTCTGCCCTTGTGAAGATGCTGCAACTGCTCTAAATTGGCCTAAGACAGTATGTAAAGAAAGGAGGTTCAAGATTTTTGACTTGGCAATTGGTGCACTTTCTGGTATATCAAACTCAGAGGTGCCACTTATACATGCAGTGTACTCTAGCATGAAGGGTTTGATCAAAATTCACAATCCCAGTGTGGTGATCACTGTGTCTGATATTGACCCCAATGTAAAGAAAGCTCTGAAGATGGCTTCAGAAGCTAATTCCAATGCTACCACTCTGGTTCTTTTACCTAGAAAATCTGTTTCTAAAGTCCTTTGGATGGCTGATCTACGTTCCACAGCATTGCCAAATTGGAACCGAATGCGGATTTCTGTCAACATTATCACTCAAAATCGAGCTCAGTCATTGACAAGACTTCTGAAATCTCTCACAGATGCTTACTACCTTGGAGATGAAGTTTCTATAACCTTCAATATGGACAGCAAAGTAGACGAAGCAACTATAAGACTAGTGAGTTCATTTGAGTGGCCTCATGGACCCAAAACCTTAAGAAGGAGAATCATCCAAGGAGGGCTAATTAGAGCAGTGAGTGAAAGCTGGTATCCTTCATCTAATGATGACTTTGGACTCCTACTTGAAGATGACATTGAAGTTTCTCCATACTATTACCTATGGATCAAATATGCCCTCCTAGCATACCACTATGATCCACAAGTCTCTCTCCCTGAGCTCTCCTCCATCTCACTTTACACTCCAAGACTAGTTGAAGTTGTGAAAGAGAGACCCAAATGGAATGCCACAGAGTTCTTCAAACCCATCCATCCAAACACGCCTTACCTGCATCAATTACCATGTAGTTGGGGTGCAGTGTTCTTCCCTAAGCACTGGagagaattctatgtgtacatgAACATGAGGTTCACAGAGAATGCCAAGGAAAACCCAGTTCAAATCCCAAGGTCTAGAACCAATGGATGGCAAGCCTCATGGAAGAAGTTCCTCATAGACATGATGTACTTGAGAGGGTATGTTAGTTTGTACCCAAATTTCCCAAACCAAGCTAGCTTCTCAACCAACCATATGGAACCAGGGGCCCATATCAGTGCAAAAGATAATGTGGTTAGGCATGACAAGCATGACTTTGAGGTTCCACTGTTGAAACAAGACTTTAGGACTCTCTTGCCAGCAATGAAGTTGCCTCCTGCTTCAAAGTTGCCATCTTTGAACCTCTTTAATCAGCCTCTTTCTCTTAAAGGCTTGAAGGCTGCTGGGGCTAAGTTGGGTCAAGATGTGCTTAGATGTAACAATATCACGGAGATTGTGTCTGTGGATCATGACACGGGTCTACCACACAGATGCTTCAAGTTCTGA 2802 0.4297 MGFGRNSTSRSGDYLEGMINEYVGGKAKMKPQRSGSAKLVASLTCLQFFFAIYATFLLYYMSPTIDLRSKPDFTWATRIAQQWRHLMVTPHVLGRYQEASSLIREDIQAQPITPSEVCEHEKIDFMQKKSNDVQMIKLKTELYKEVLEFQSRSIGIETLAELMAMKSKWDLKGPNKPKITVILNHFKRKTLCAQIDSLLEQTLPFHHVWVLSFGSPNEVSLRRIVESYNNSRISFISSGYDFKYYGRFQMALQTEGDLVYIVDDDMIPGRKMLQILAHVAGTDKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSADLVKTLFIETPFTFATGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYMTQWAAMYPQKIDALFYAHSLDEVKALAPLLDKFRSTVGKKAYVVVSGTNFCPCEDAATALNWPKTVCKERRFKIFDLAIGALSGISNSEVPLIHAVYSSMKGLIKIHNPSVVITVSDIDPNVKKALKMASEANSNATTLVLLPRKSVSKVLWMADLRSTALPNWNRMRISVNIITQNRAQSLTRLLKSLTDAYYLGDEVSITFNMDSKVDEATIRLVSSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSNDDFGLLLEDDIEVSPYYYLWIKYALLAYHYDPQVSLPELSSISLYTPRLVEVVKERPKWNATEFFKPIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTENAKENPVQIPRSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQASFSTNHMEPGAHISAKDNVVRHDKHDFEVPLLKQDFRTLLPAMKLPPASKLPSLNLFNQPLSLKGLKAAGAKLGQDVLRCNNITEIVSVDHDTGLPHRCFKF 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0311 933 SUPERFAMILY Nucleotide-diphospho-sugar transferases 174 376 IPR029044 -
Sto12g0311 933 PANTHER OSJNBA0004B13.7 PROTEIN 27 933 - -
Sto12g0311 933 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 163 386 IPR029044 -
Sto12g0311 933 SUPERFAMILY Nucleotide-diphospho-sugar transferases 597 786 IPR029044 -
Sto12g0311 933 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 599 848 IPR029044 -
Sto12g0311 933 CDD Glyco_tranf_GTA_type 181 280 - -
Sto12g0311 933 PANTHER - 27 933 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0311 Sto-Chr12 1894958 1897997 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0311 - - gmx:100790938 1676.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0311 12 1894958 1897997 Sto12g0311 12 1894958 1897997 ECH