LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto12g0299	ATGCCCTCCGATACGAGCTCTTCCACCTCCGACCATGACTTTGATCAAAACCCTCAGTCGATCGAAGAACAATTGGCTTCCGTCGCATTAACCCTCTCCGATGGCGAACCATCGGCGAATCAAGAAACAAACGGCGTCGTCCGTGAGTTGGTcaatcagaatactcaaattgCGCCGGAGGAACAGGTTCAGTGTAATTCAGTTGCTGCTGAAGAGATTGGAGAGGTTAGGGAATCTTCCAACCACGGTGTTGTATGGGGGAGGACCATTTCGGAGCTCGAGATGGATGGGCCGTCCAGCCCTAGTAGTAGTGGCTATGCGGGAGAAAGGGGCAGTAGCAGTGCTTCTAGCGAGTCGATAACTGACGACGTTGTTGAACAGCACGAAATAGAGCAGGTGAGGAATGATGATACCATCGATGGAATCTCTGATTCTTATACGCCCTGGCTTCCGGGGAAACGACACGAAGACGAGGATGATGCTTCCATATCatggaggaaaagaaagaagcatTTTTTCGTTCTGAGTAATTCTGGTAAACCAATATATTCAAGATATGGAGATGAGCACAAGCTTGCAGGATTTTCAGCAACTTTACAGGCAATAATTTCCTTTGTGGAGAACGGggGTGACCGTGTCAAATTGCTGAGGGCTGGAAAGCATCAGGTGGTTTTTCTTGTGAAAGGACCAATTTACTTAGTTTGCATCAGCTGCACTGAAGAACCTTATGAGTCATTAAAGGGGCAGTTGGAGCTTATTTATGGTCAGATGCTTGTTATATTAACAAAGTCAGTGAACAGATGTTTCGAGAAGAATCCAAAATTTGACATGACACCATTGCTTGGAGGAACAGACATTGTCTTCTCTTCTCTAATACATTCTTTTAGTTGGAATCCAGCTACGTTTCTTCATGCCTATACTTGTCTGCCTCTTGCGTATGCTACAAGACAAGCTGCAGGGGCTATCTTGCAAGATGTTGCTGATTCAGGTGTTTTGTTTGCAATACTAATGAGCAGGCACAAGGTAGTCAGTCTTGTTGGTGCTCAGAAAGCTTCTCTTCATCCAGATGATATGCTGCTGCTTGCCAATTTTGTTATGATGTCAGAATCATTTTCTCCAGTTTGCTTGCCAAGATATAATCCTTTTGCATTTTTGTATGCGTATATCCATTATTTTGATGCTGACACATATTTGATGTTGCTAACCACTAGTTCAGATGCCTTTTATCATCTTAAGGATTGCAGGATTCGTATCGAAATGGTCCTTCTGAAGTCGAATGTCCTTAGTGAAGTTCAGAGATCTTTGCTAGATGGTGGTATGCACATTGAGGATCTGCTTGTCAACCCCTTAACCCGTTCTGGATCATCTCCTCATTTGGGCCAGCACAGGCCTCCAACAGATTCTTCTGACCTGTTGAACCAACCTTATTTTGGCATTGGTGGTCCTACTGGGTTGTGGCATTTCATATACCGCAGTATATATCTGGATCAATATGTATCTTCAGAGTTCTCAGCACCAATTAACACTCCTCGGCAGCAAAAAAGACTCTATAGAGCTTACCAGAAACTTTTTGCATCCATGCATGATAAAGGGGTTGGGCCACACAAAACACAATTTAGAAGAGATGAAAGCTACGTTATTCTCTGTTGGGTGACACAGGATTTTGAGCTTTATGCAGCCTTTGATCCCCTTGCAGACAagGCCTCGGCAATAAAGACTTGCAACCGGGTTTGTCAATGGGTAAAAgatgtggaaaatgagatatttTTGCTAGGATCTAGCCCCTTTTCATGGTGA	1797	0.4263	MPSDTSSSTSDHDFDQNPQSIEEQLASVALTLSDGEPSANQETNGVVRELVNQNTQIAPEEQVQCNSVAAEEIGEVRESSNHGVVWGRTISELEMDGPSSPSSSGYAGERGSSSASSESITDDVVEQHEIEQVRNDDTIDGISDSYTPWLPGKRHEDEDDASISWRKRKKHFFVLSNSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDRVKLLRAGKHQVVFLVKGPIYLVCISCTEEPYESLKGQLELIYGQMLVILTKSVNRCFEKNPKFDMTPLLGGTDIVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAGAILQDVADSGVLFAILMSRHKVVSLVGAQKASLHPDDMLLLANFVMMSESFSPVCLPRYNPFAFLYAYIHYFDADTYLMLLTTSSDAFYHLKDCRIRIEMVLLKSNVLSEVQRSLLDGGMHIEDLLVNPLTRSGSSPHLGQHRPPTDSSDLLNQPYFGIGGPTGLWHFIYRSIYLDQYVSSEFSAPINTPRQQKRLYRAYQKLFASMHDKGVGPHKTQFRRDESYVILCWVTQDFELYAAFDPLADKASAIKTCNRVCQWVKDVENEIFLLGSSPFSW	598

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto12g0299	598	MobiDBLite	consensus disorder prediction	1	20	-	-
	Sto12g0299	598	PANTHER	BNAC04G15860D PROTEIN	71	598	-	-
	Sto12g0299	598	MobiDBLite	consensus disorder prediction	122	138	-	-
	Sto12g0299	598	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	170	187	IPR004353	GO:0006623
	Sto12g0299	598	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	188	208	IPR004353	GO:0006623
	Sto12g0299	598	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	222	236	IPR004353	GO:0006623
	Sto12g0299	598	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	273	285	IPR004353	GO:0006623
	Sto12g0299	598	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	302	323	IPR004353	GO:0006623
	Sto12g0299	598	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	369	392	IPR004353	GO:0006623
	Sto12g0299	598	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	397	423	IPR004353	GO:0006623
	Sto12g0299	598	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	547	561	IPR004353	GO:0006623
	Sto12g0299	598	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	563	576	IPR004353	GO:0006623
	Sto12g0299	598	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	576	596	IPR004353	GO:0006623
	Sto12g0299	598	Pfam	First Longin domain of FUZ, MON1 and HPS1	170	290	IPR043972	GO:0016192
	Sto12g0299	598	PANTHER	SAND PROTEIN-RELATED	71	598	IPR004353	GO:0006623
	Sto12g0299	598	MobiDBLite	consensus disorder prediction	93	153	-	-
	Sto12g0299	598	Pfam	Second Longin domain of FUZ, MON1 and HPS1	331	416	IPR043971	GO:0016192
	Sto12g0299	598	MobiDBLite	consensus disorder prediction	95	121	-	-
	Sto12g0299	598	Pfam	Third Longin domain of FUZ, MON1 and HPS1	484	584	IPR043970	GO:0016192

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto12g0299	Sto-Chr12	1788158	1794145	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto12g0299	K20195		-	zju:107411372	884.019

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto7g0945	7	7434184	7440599	Sto12g0299	12	1788158	1794145	CCT
	Sto12g0299	12	1788158	1794145	Sto12g0299	12	1788158	1794145	ECH