Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0288 ATGAATATTGCGACAAGAATAGCAGCACAAGCACTGCCTCTTCCCCACGCTCGTCTCCTTCCCATCGTCTCTTTCCGAGGGAATTGCAATTGTGCTTTAGGGCTTCACAAGTTGGTCTTTGTGCCCCATTTTAAACACGCTAGGAGGCTGAGAGGAAATTTTACCAGAAATATGGCTTGGAGTTTGGAGAATTCTGATCTGGGTATTGAAAGTAAGTTAGGGGTGGTTCGTCCAGCAACAGATGCTTTCGCTGCAGAAGCTGTTGAAGCTGTGAGAGCTGGGAAAGTTATTGCGGTACCCACTGATACACTCTATGGGTTTGCTTGTGATGCTTGCTCTTTGGAAGCAGTTAACAGGATTTATGAGATTAAAGGACGTAAGCATACAAGTCCCCTAGCTATCTGTGTTGGGGATGTATCAGACATAGGGCGTTTTGCAGTCACTAACCATCTGCCTTGCGGCCTGCTTGATTCCCTACTTCCAGGGCCTGTTACCGTTGTGCTAAAACGAGGAGAGTCAAGTGTTCTTGAACGATCTTTGAACCCAGGATTTGATAGCATCGGGGTTAGAGTCCCTGACTGCAATTTCATCAGGGTCATTGCCCGTGGTTCAGGAACTGCTCTGGCCCTTACCAGTGCAAACCTAAGTGGACAGTCAAGTAGTGTTTGCATCAAGGATTTTGAGGACCTCTGGGGACATTGTGCCCATGTCTATGATGGTGGCTTGCTTCCATCAGGTCGTGCAGGATCAACAGTTGTGGACCTCACTGTACCAAACAAGTACAAGATACTTAGACCTGGAAGTGCAAAGGAAGAGACAGTTGCCATCTTAGAGAAGCATTCTCTAGTTGAAGCAATGACCACTTCAAATGAACAGTGA 879 0.4687 MNIATRIAAQALPLPHARLLPIVSFRGNCNCALGLHKLVFVPHFKHARRLRGNFTRNMAWSLENSDLGIESKLGVVRPATDAFAAEAVEAVRAGKVIAVPTDTLYGFACDACSLEAVNRIYEIKGRKHTSPLAICVGDVSDIGRFAVTNHLPCGLLDSLLPGPVTVVLKRGESSVLERSLNPGFDSIGVRVPDCNFIRVIARGSGTALALTSANLSGQSSSVCIKDFEDLWGHCAHVYDGGLLPSGRAGSTVVDLTVPNKYKILRPGSAKEETVAILEKHSLVEAMTTSNEQ 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0288 292 Pfam Telomere recombination 89 267 IPR006070 GO:0003725
Sto12g0288 292 ProSiteProfiles YrdC-like domain profile. 81 269 IPR006070 GO:0003725
Sto12g0288 292 SUPERFAMILY YrdC/RibB 84 273 IPR017945 -
Sto12g0288 292 TIGRFAM TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 85 274 IPR006070 GO:0003725
Sto12g0288 292 PANTHER SUA5 27 287 - -
Sto12g0288 292 Gene3D DHBP synthase 76 280 - -
Sto12g0288 292 PANTHER YRDC DOMAIN-CONTAINING PROTEIN, MITOCHONDRIAL 27 287 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0288 K07566 - jre:108990110 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0288 12 1741779 1743856 Sto12g0288 12 1741779 1743856 ECH