Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0283 ATGAGtgttttcttcatttcttcacCTAGCAAGAGGAAATCTTCCGGTCATATCAAAGGAGTTATATGTGGTGCTTCAAATGATGTATTtttgctaaaagaaaaagattgtTTTGAAATTACATTTGATGATGCAGGAAGTAAAAAGAAGATGAgtgaagagaagagagacaTGATAAGTAAGTTACCAGATGACATCATCGTGAATATTATATCAAGATTGACAACAGAAGAAGCAGCTAGGACTAGCATCCTGTCAACTAGATGGACACCCCTATGGCTGCATTCCCATGGCTTCTTCAACTTTGACAATTCCCTTCGAATCTACCGCTTGCGTCGCCGACAATGTGGACAACTCAGAAAAATTCGCCTTTTTTTGTCTGAATGGCAGAGGTTCATGAACACACTCCAAAAAACACTTGACTCACTTCAGACTCCAACCATCAAAGGGTTAAGAATTTGTATTGATCTTGGAAACCCCAGAAAAATCCCTGACTGGCTTAACTTTGCTTCACGCAAGAAAGTTGAAACGCTTGAGCTTGATTTCACTTTCACCTATACTTATCTATTGTTGGGAATAAGGGACAGCATTAGGAACCTTCTATCACCAGACCTTCTCTTTGGTCCACGTGGCTTCAAGTTTCAGTCTCTTCATGTCTTGCGTTTGGCTTCTGTGGACATAACAGGAGACACCCTCCAGCAATTTCTGTCTGGCTGTTCATGTCTTGAGACATTATGTGTTAGGGACTCCAGAATCCTAACACACCTCAAGGTGGCTTCTGGGACTCTCAAACATTTGGAGTTGGAAGAATGCAACGTTCCGTTTCTGGAagtttctgctcaaaatctggTCGTATTCACATACAGTGGAGAGGTTTGTGACAGTTTTCCCTTCAAGTGTGTTCCAAACCTTGAGCAAGTGTCCTTTGGGGGTCCCTATGCTAGGTACGTGGAAACAAACATGAAGGATATTGATTTCTTTCGCTTATTCTCTCAGCTCAGTGTTGTAAAATTAGAACTAAGGGCGCGAGATGAGACAATTCATGTAGACCTACCTGAGTTCAGTAATGTGAAGCATTTGGAGTTGTTCATTCCTCACGCTGGTGGAATAAATCTCAGCCGTCATGTTTCTCTACTTAGTGCATTTCCTTCTATATGCAAGCTTAAACTAAAGTTCCAAAGCTTCGGTATCTCAAGTAGGGAAGTGATGGAGTTTGAGGGGAATCTGAAACATGAATATGAAAGGCTGGAGGAATTGGAAGTGTGTGGATACAGAAGAGACCCGTGTCAAATAGAGTTTATACTGTATGTAGTTGAGAATGCTGCTAATCTGAAGAGGATTGCTTTTGATCCAGTCTCAACATTTTATAGTGCAAGAACTGCTGATGTGAAGAAGGTGATCGGAGCCTTGCGACGTGACTCTCTGGTATGGTTTGCTGATGGCCTCAAACCCTATATACCTGATTCCGTTGAATTGATTGTCTTGTAA 1488 0.3965 MSVFFISSPSKRKSSGHIKGVICGASNDVFLLKEKDCFEITFDDAGSKKKMSEEKRDMISKLPDDIIVNIISRLTTEEAARTSILSTRWTPLWLHSHGFFNFDNSLRIYRLRRRQCGQLRKIRLFLSEWQRFMNTLQKTLDSLQTPTIKGLRICIDLGNPRKIPDWLNFASRKKVETLELDFTFTYTYLLLGIRDSIRNLLSPDLLFGPRGFKFQSLHVLRLASVDITGDTLQQFLSGCSCLETLCVRDSRILTHLKVASGTLKHLELEECNVPFLEVSAQNLVVFTYSGEVCDSFPFKCVPNLEQVSFGGPYARYVETNMKDIDFFRLFSQLSVVKLELRARDETIHVDLPEFSNVKHLELFIPHAGGINLSRHVSLLSAFPSICKLKLKFQSFGISSREVMEFEGNLKHEYERLEELEVCGYRRDPCQIEFILYVVENAANLKRIAFDPVSTFYSARTADVKKVIGALRRDSLVWFADGLKPYIPDSVELIVL 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0283 495 Pfam F-box domain 59 89 IPR001810 GO:0005515
Sto12g0283 495 PANTHER LIGASE, PUTATIVE-RELATED 48 495 - -
Sto12g0283 495 PANTHER F-BOX PROTEIN-LIKE 48 495 - -
Sto12g0283 495 Gene3D - 46 134 - -
Sto12g0283 495 SUPERFAMILY F-box domain 55 105 IPR036047 GO:0005515
Sto12g0283 495 Gene3D Ribonuclease Inhibitor 183 464 IPR032675 -
Sto12g0283 495 SUPERFAMILY RNI-like 172 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0283 Sto-Chr12 1719093 1722283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0283 57 362 EF-hand Containing Proteins AT5G41840 26.590 1.24e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0283 - - gmx:100778140 355.91