Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0277 ATGAAAGCGACACAGATTCTGTTCCTTTTTTGTTGCTTCCTCGGCATTCTGGTCTACACTTGCTTTTGCGCTAATGTCACCTACGACCACCGTGCATTGCTCATCGGCGGCAACCGCCGCATCCTCATCTCTGGTTCTATTCATTATCCTCGTAGTACTCCCGAGATGTGGCCGGACCTTATTCAGAAATCCAAAGATGGAGGATTGAATGTGATTGAAACCTACGTTTTCTGGAACAAGCATGAACCTGTTAGAGGCCAGTATAATTTTGAAGGCGGGAACGACATAGTGAAATTTGTCAAGTTAGTTGGAGCAGCAGGTCTTTATGTGCATCTCCGGATTGGACCATACGTATGCGCTGAATGGAACTATGGTGGTTTCCCTCTGTGGTTGCATTTTATTCCCGGAATTCAGTTCAGAACTAATAATGAACCATTCAAGGCAGAAATGCAGCGATTTACTGCTAAAATTGTGGACTTGATGAAGCAAGAGAACCTCTATGCGTCTCAGGGAGGACCTATTATTTTATCTCAGATTGAAAATGAATATGGTAATGGTGACATCGAGCCTCGGTATGGTCCTGCTGCTAAACCCTACGTCAATTGGGCGGCATCAATGGCTACATCGCTTGATACCGGTGTTCCATGGATCATGTGCCAGCAAGCAGATGCTCCTGACCCAATTATTAACACTTGCAATGGATTTTACTGTGATCAGTTTACGCCAAACTCTaaccaaaaaccaaaatttTGGACTGAGAATTGGAGTGGATGGTTCCGATCATTTGGTGGTGCAGTGCCTTACAGACCAGTAGAGGATCTTGCATTTGCTGTGGCACGCTTTTTCCAGCGAGGTGGAACATTACAGAATTACTATATGTACCATGGTGGGACCAACTTTGACCGAACTTCTGGTGGACCATTCATCACTACAACCTATGATTATGATGCACCCATTGATGAGTTTGGAATTATTAGACAGCCTAAATGGGGCCACCTTAAGGATGTGCATAAGGCCATAATGCTTTGTGAAGAAGCATTGATAGCCACTGATCCCAAGATTACATCAATTGGTCCAAATCTGGAGGCTGCAGTTTACCAGACAGGATCTGTATGTGCTGCATTTCTTGCCAATTTTGGCACAGGATCCGATGCAACAGTAAATTTCAATGGCAATTCGTATCACTTGCCCGCATGGTCTGTGAGCATCTTACCAGACTGCAAGAATGTAGCGCTTAATACTGCAAAGATAAATTCTCCATCTACTATTTCAAGCttcacaagagaacctttaaaaGAAGATGGTGATTCTTTAGATGGTTCTAGCTCTGGATGGAGTTGGATTAGTGAACCTGTAGGTATTTCAAAAGCTGATGCATTCACAAAAGTAGGATTACTGGAGCAAATAAATACAACAGCAGATAGAAGCGACTACTTGTGGTACTCATTGAGCATTGATCTTCAAGATGATGGTGGTCCTCAAACTGTCCTTCACATTGAATCACTTGGTCATGCTCTTCATGCCTTTATCAATGGGAAGCTTGCAGGGAGTGGAACAGGAAAAAATGGCCAACAAAAAGTGACTGTGGACATTCCTGTCACCCTTGTGGCTGGGAAGAACACTATTGATCTCCTGAGTTTAACTGTGGGACTTCAGAACTATGGAGCATTTTTTGACACAGTGGGTGCTGGAATCACTGGTCCAGTTAGATTGAACGGTTTGAAAAATGGAAGCATTCTTGATCTCTCTTCCCAGCAGTGGACATATCAGGTTGGTCTTAAAGGTGAACAATTGGGTCTGCCTGATGGAACTTCAGGACAGTGGAACCCAGGATCTACTTTACCTAAGAAGCAACCGTTGACTTGGTACAAGACAAATTTTGCTGCACCTTCTGGAAGTGATCCAGTAGCAATTGACTTCACGGGTATGGGGAAAGGTGAGGCATGGGTAAATGGACAAAGCATTGGACGTTTCTGGCCCACAAATTTCGCTCCAAAAGATGGTTGCACCAATGCATGCAATTACAGAGGGCCTTATAATTCAAACAAATGTCTCAAGAATTGTGGACAACCATCACAATCATTATACCATGTACCACGCTCATGGTTAAAACCTAGTGGTAACACACTTGTACTGTTTGAGGAAAATGGAGGTGATCCAACTCAAATAACTTTTGCTACAAAACAGATAGGAAGCTTGTGTGCACATGTTTCAGAATCTCACCCTCCACCTGTAGACTTGTGGAAGTCAGACACGGAATCAGGAAGTAAACTAGGGCCTGTGCTTTCGCTGGAATGCCCTTATCCTAATCAGGTCATCTCTTCCATTAAATTTGCAAGCTTTGGAACACCTCAAGGAACTTGTGGAAACTTCAACCATGGTCGTTGCAGGAGCAAAAGAAGTCTCTCCATTATACAGAAGGCATGCGTTGGATCAAGAAGCTGTAGCGTCGGAGTGTCTGCCAATACATTTGGGGATCCATGCAGAGGAGTTGCCAAGAGTTTAGCAGTTGAGGCTGCTTGTACATAG 2529 0.4338 MKATQILFLFCCFLGILVYTCFCANVTYDHRALLIGGNRRILISGSIHYPRSTPEMWPDLIQKSKDGGLNVIETYVFWNKHEPVRGQYNFEGGNDIVKFVKLVGAAGLYVHLRIGPYVCAEWNYGGFPLWLHFIPGIQFRTNNEPFKAEMQRFTAKIVDLMKQENLYASQGGPIILSQIENEYGNGDIEPRYGPAAKPYVNWAASMATSLDTGVPWIMCQQADAPDPIINTCNGFYCDQFTPNSNQKPKFWTENWSGWFRSFGGAVPYRPVEDLAFAVARFFQRGGTLQNYYMYHGGTNFDRTSGGPFITTTYDYDAPIDEFGIIRQPKWGHLKDVHKAIMLCEEALIATDPKITSIGPNLEAAVYQTGSVCAAFLANFGTGSDATVNFNGNSYHLPAWSVSILPDCKNVALNTAKINSPSTISSFTREPLKEDGDSLDGSSSGWSWISEPVGISKADAFTKVGLLEQINTTADRSDYLWYSLSIDLQDDGGPQTVLHIESLGHALHAFINGKLAGSGTGKNGQQKVTVDIPVTLVAGKNTIDLLSLTVGLQNYGAFFDTVGAGITGPVRLNGLKNGSILDLSSQQWTYQVGLKGEQLGLPDGTSGQWNPGSTLPKKQPLTWYKTNFAAPSGSDPVAIDFTGMGKGEAWVNGQSIGRFWPTNFAPKDGCTNACNYRGPYNSNKCLKNCGQPSQSLYHVPRSWLKPSGNTLVLFEENGGDPTQITFATKQIGSLCAHVSESHPPPVDLWKSDTESGSKLGPVLSLECPYPNQVISSIKFASFGTPQGTCGNFNHGRCRSKRSLSIIQKACVGSRSCSVGVSANTFGDPCRGVAKSLAVEAACT 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0277 842 Pfam Beta-sandwich domain in beta galactosidase 347 417 IPR041392 -
Sto12g0277 842 SUPERFAMILY (Trans)glycosidases 26 344 IPR017853 -
Sto12g0277 842 Gene3D Glycosidases 21 342 - -
Sto12g0277 842 Gene3D - 602 734 - -
Sto12g0277 842 Pfam Galactose binding lectin domain 764 841 IPR000922 GO:0030246
Sto12g0277 842 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Sto12g0277 842 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Sto12g0277 842 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Sto12g0277 842 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Sto12g0277 842 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Sto12g0277 842 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Sto12g0277 842 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Sto12g0277 842 PRINTS Glycosyl hydrolase family 35 signature 618 632 IPR001944 GO:0004553|GO:0005975
Sto12g0277 842 PRINTS Glycosyl hydrolase family 35 signature 645 661 IPR001944 GO:0004553|GO:0005975
Sto12g0277 842 Gene3D - 424 572 - -
Sto12g0277 842 Pfam Glycosyl hydrolases family 35 33 339 IPR031330 -
Sto12g0277 842 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Sto12g0277 842 SUPERFAMILY Galactose-binding domain-like 401 573 IPR008979 -
Sto12g0277 842 Gene3D - 752 842 IPR043159 -
Sto12g0277 842 SUPERFAMILY Galactose-binding domain-like 586 751 IPR008979 -
Sto12g0277 842 PANTHER BETA-GALACTOSIDASE 5 836 - -
Sto12g0277 842 PANTHER BETA-GALACTOSIDASE RELATED 5 836 IPR001944 GO:0004553|GO:0005975
Sto12g0277 842 ProSiteProfiles SUEL-type lectin domain profile. 756 842 IPR000922 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0277 Sto-Chr12 1686695 1691324 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0277 23 695 Glycoside Hydrolase AT2G28470 74.963 0.0 1061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0277 - - gmx:100804036 1433.7