Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0276 ATGTGGCCCCACCTTATTCAGAAAGCCAAAGATGGAGGACTCAATATGATTGAGACCTATGTTTTCTGGAACAAGCATGAACCTGTTCCAGGCCagTATAATTTTGAAGGCGGGAATGATATTGTCAAATTTCTCAACTTAGTAGCAGCGGCGGGTCTATACGTGCATCTCCGGATTGGTCCATACGTATGCGCCGAATGGAACTATGGTGGTTTCCCTGTTTGGTTGCATCTTATTCCCGGAATTCAGTTCCGAACTGATAATCAACCATTCAAGGCACAAATGCAGCGTTTTACTGCTAAAATTGTGGACTTGATGAAGCAAAACAAGCTCTTCGCGTCTCAGGGAGGGCCTATTGTCATGTCTCAGATCGAGAATGAGTATGGCAACATTCATTGGGCCCATGGTGCTGCTGGTAAAACCTACATTAACTGGGCAGCATCAATGGCTTCGTCTCTTGATACGGGTGTTCCCTGGAACATGTGCCAACAACCAGATGCTCCTCATCCCATGATTAACACTTGCAATGGATTTTACTGCGATCAATTTACACCAAACTCTgaccaaaaaccaaaaatgtGGACTGAGATGTGGAGCGGATGGTTTCTTACATTTGGTAGTGCAGTGCCTTATAGACCTGTAGAAGATGTTGCATTCGCCGTGGCACGCTTTTTCCAGCGGGGTGGAacattaaataattactatatgTACCATGGTGGAACCAACTTTGGTCGCACTTCTGGGGGACCATTCATCTCTACAAGTTATGATTATGATGCACCAATTGACGAATATGGACATATTAGACAGCCTAAGTGGGGCCACCTTAAAGATTTGCACAAGACCATAATGCTTTGTGAGGAAGCACTGATAGCCACTGATCCCAATATTACATCACTTGGTCATAATCTAGAGGCTGCAGTTTACCAGACAGAATCTTCATGTGCCGCCTTCCTTGCAAATGTGGACGCCAAGTCTGATGCAAAAGTTCGTTTTCGTGGCAAGTCTTACAACTTGCCTGCTTGGTCAGTGAGCATCTTACCAGATTGCAAGAATGTGGCATTTAATACTGCAAAGATTAATTCTGTATCTATGACTTCAAGCttcacaagagaacctttaagaGAAGATATTAATTCTGTAGAAGGTTCTATGGCCAGATGGGTTTGGATAAGTGAACCAGTAGGCATATCTGGGGCTGATACATTCACAAGACGTGGATTACTAGAGCAAATAACTACAACAGCAGATAAAAGTGACTACTTGTGGTACTCATTAAGCATTGATCTTGAAGATGATGGTGGCCCTCAAACTGTCCTTCACATTGAATCACTTGGTCATGCCCTTCATGCTTTTATCAATGGGAAGCTTGCAGGGAGTGGAATAGGTGATAGTGCCAAAGTTGTGGACATTCCCGTCACCCTTGTGGCTAGGAAGAACAAAATCGATCTCCTCAGTTTAACTGTGGGACTTCAGAACTCCGGAGCCTTTTTTGACAGAGCGGGTGCTGGAATCACTGGTCCTGTTATATTGAACGGTTTAAAAAATGGGAGCTCTCTGAATCTCACATCCTACCACTGGACATATCAGATTGGTCTAAGAGGTGACCACTTAGGTCTGTCTGCTGGAAGTTCTGAACAGTGGATCTCGGGTCCTAGCTTACCTAAGAACCAACCATTGACTTGGTACAAGCAGTCGTTCTTTGCTGCTCCTTCTGGAAGTAATCCAGTAGCAATTGACTTGACGGGTATGGGAAAAGGTGAGGCTTGGATAAATGGACAAAGCATTGGGCGATTCTGGCCCACACTCGTGGCTCCAAACAATGGATGTACGGAAGCATGCGATTATAGAGGGAGTTATAGTCAAACCAAATGTCTCAAGAACTGTGGACAACCATCACAATCATTATACCATGTACCACGCTCGTGGCTGAAACCAAGAGACAATGTAATTGTGTTGTTTGAGGAAGTTGGAGGTGATCCAACAAAAATAACTTTTGTTACAAGGCAGATAGGAAGCTTGTGTGCACATGTTTCAGAATCTCATCCACCACCTCTAGACTTGTGGAATTCGGacacaaaatcaagaaagaaacgAGGACCTGTACTTTCCCTCCAGTGCCCTTATCCCAATCAAGTCATCTCTTCCATTAAATTTGCAAGCTTTGGAACACCTCAAGGGGCTTGTGGGAACTTCAGCCATGGCAGCTGCAGCAGCAGCACAAGTCTATCCATTTTGGAGAAGGCGTGCGTTGGATCAAGAAACTGTAGTGTTGGCGTGTCTGTTCATACATTTGGGGATGCATGCAGAGGAGTGAGCAAGAGTTTAGCAGTTGAGGCTGCTTGTACATAG 2352 0.4341 MWPHLIQKAKDGGLNMIETYVFWNKHEPVPGQYNFEGGNDIVKFLNLVAAAGLYVHLRIGPYVCAEWNYGGFPVWLHLIPGIQFRTDNQPFKAQMQRFTAKIVDLMKQNKLFASQGGPIVMSQIENEYGNIHWAHGAAGKTYINWAASMASSLDTGVPWNMCQQPDAPHPMINTCNGFYCDQFTPNSDQKPKMWTEMWSGWFLTFGSAVPYRPVEDVAFAVARFFQRGGTLNNYYMYHGGTNFGRTSGGPFISTSYDYDAPIDEYGHIRQPKWGHLKDLHKTIMLCEEALIATDPNITSLGHNLEAAVYQTESSCAAFLANVDAKSDAKVRFRGKSYNLPAWSVSILPDCKNVAFNTAKINSVSMTSSFTREPLREDINSVEGSMARWVWISEPVGISGADTFTRRGLLEQITTTADKSDYLWYSLSIDLEDDGGPQTVLHIESLGHALHAFINGKLAGSGIGDSAKVVDIPVTLVARKNKIDLLSLTVGLQNSGAFFDRAGAGITGPVILNGLKNGSSLNLTSYHWTYQIGLRGDHLGLSAGSSEQWISGPSLPKNQPLTWYKQSFFAAPSGSNPVAIDLTGMGKGEAWINGQSIGRFWPTLVAPNNGCTEACDYRGSYSQTKCLKNCGQPSQSLYHVPRSWLKPRDNVIVLFEEVGGDPTKITFVTRQIGSLCAHVSESHPPPLDLWNSDTKSRKKRGPVLSLQCPYPNQVISSIKFASFGTPQGACGNFSHGSCSSSTSLSILEKACVGSRNCSVGVSVHTFGDACRGVSKSLAVEAACT 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0276 783 Gene3D - 327 512 - -
Sto12g0276 783 Pfam Glycosyl hydrolases family 35 1 282 IPR031330 -
Sto12g0276 783 Gene3D Glycosidases 1 285 - -
Sto12g0276 783 SUPERFAMILY Galactose-binding domain-like 344 513 IPR008979 -
Sto12g0276 783 SUPERFAMILY (Trans)glycosidases 1 287 IPR017853 -
Sto12g0276 783 Pfam Galactose binding lectin domain 705 782 IPR000922 GO:0030246
Sto12g0276 783 Gene3D - 537 675 - -
Sto12g0276 783 ProSiteProfiles SUEL-type lectin domain profile. 697 783 IPR000922 GO:0030246
Sto12g0276 783 SUPERFAMILY Galactose-binding domain-like 526 692 IPR008979 -
Sto12g0276 783 PRINTS Glycosyl hydrolase family 35 signature 2 20 IPR001944 GO:0004553|GO:0005975
Sto12g0276 783 PRINTS Glycosyl hydrolase family 35 signature 57 76 IPR001944 GO:0004553|GO:0005975
Sto12g0276 783 PRINTS Glycosyl hydrolase family 35 signature 114 129 IPR001944 GO:0004553|GO:0005975
Sto12g0276 783 PRINTS Glycosyl hydrolase family 35 signature 193 208 IPR001944 GO:0004553|GO:0005975
Sto12g0276 783 PRINTS Glycosyl hydrolase family 35 signature 230 245 IPR001944 GO:0004553|GO:0005975
Sto12g0276 783 PRINTS Glycosyl hydrolase family 35 signature 250 266 IPR001944 GO:0004553|GO:0005975
Sto12g0276 783 PRINTS Glycosyl hydrolase family 35 signature 558 572 IPR001944 GO:0004553|GO:0005975
Sto12g0276 783 PRINTS Glycosyl hydrolase family 35 signature 586 602 IPR001944 GO:0004553|GO:0005975
Sto12g0276 783 Pfam Beta-sandwich domain in beta galactosidase 290 360 IPR041392 -
Sto12g0276 783 Gene3D - 691 783 IPR043159 -
Sto12g0276 783 PANTHER BETA-GALACTOSIDASE 1 777 - -
Sto12g0276 783 PANTHER BETA-GALACTOSIDASE RELATED 1 777 IPR001944 GO:0004553|GO:0005975
Sto12g0276 783 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 116 128 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0276 Sto-Chr12 1676311 1680710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0276 1 636 Glycoside Hydrolase AT2G28470 72.118 0.0 976
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0276 - - gmx:100804036 1229.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0276 12 1676311 1680710 Sto12g0276 12 1676311 1680710 ECH