Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0273 ATGTTACGCAATCATGTTTTGGCCACACATCTGACATCTGACATCCGAAATCTCAGTGTGTTACCTTCCTTCCCAAGCAATAGCCAGGTGGCTACTCTCTCCCCTTCAAATCCTATAACCTCAGTCTCTTATGACGCACCACCTCTCTCCCAGTCTCCGGCGGCGGCTCCCGCCCCTTCACCGTCTACTCCGCCGACGGACATAATCAGAATCCTGAACAAGGCGGGAGGATTCACCACTCTAATTCGTCTTCTGAAGACAACCCAAGTGGCGAACCAAATAAACTCGCAGCTTCTAAACTCAAACGGAGGGATAACGTTGTTCGCTCCCAGCGACAATGCGTTTTCCAGCCTCAAACCCGGATTCCTCAATTCCCTCAACGACCAGCAAAAGAACGAGCTCATCCAATTCCACATGCTCCCCAACTTCGTCGCACTCTCCAATTTTGACACTTTGAGCAACCCCGTCCGCACCCAGGCCGGCGCCGATCCCGATCGCCTCGCCCTCAACGTCACCGGTGCCGGCAACCAAGTCAACATGACCACCGGCGTTGTCAACACCACCGTGGGTGGCACTGTGTATTCCGATAATCAGCTGGCGGTGTATCAGGTCGACAAGGTGCTCCTGCCCCGGGACTTCTTCGAGGCCAAGCCTCCTGCGCCGGCGCCGGCGCCGGAAAAGTCCAAGTCTTCTAAAAAGAAATCGGCGGAAGGCCCTGCTAGTCCGGCGGATGTCTCTGGCGGTGTGAGTTTGAGACAGAGGAATGGGATGTGGGAGGGCATTGTTGGAGTTGCAGCAATAATGGCGTTTTGGTTGTGA 819 0.5495 MLRNHVLATHLTSDIRNLSVLPSFPSNSQVATLSPSNPITSVSYDAPPLSQSPAAAPAPSPSTPPTDIIRILNKAGGFTTLIRLLKTTQVANQINSQLLNSNGGITLFAPSDNAFSSLKPGFLNSLNDQQKNELIQFHMLPNFVALSNFDTLSNPVRTQAGADPDRLALNVTGAGNQVNMTTGVVNTTVGGTVYSDNQLAVYQVDKVLLPRDFFEAKPPAPAPAPEKSKSSKKKSAEGPASPADVSGGVSLRQRNGMWEGIVGVAAIMAFWL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0273 272 ProSiteProfiles FAS1/BIgH3 domain profile. 65 208 IPR000782 -
Sto12g0273 272 SUPERFAMILY FAS1 domain 53 211 IPR036378 -
Sto12g0273 272 MobiDBLite consensus disorder prediction 42 65 - -
Sto12g0273 272 Gene3D FAS1 domain 42 211 IPR036378 -
Sto12g0273 272 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 51 268 IPR045003 -
Sto12g0273 272 SMART fasc_3 106 211 IPR000782 -
Sto12g0273 272 Pfam Fasciclin domain 77 210 IPR000782 -
Sto12g0273 272 MobiDBLite consensus disorder prediction 216 249 - -
Sto12g0273 272 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 51 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0273 Sto-Chr12 1669907 1670956 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0273 - - ahf:112786352 279.641