Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0271 ATGGAGGAGGTGGGATTTTATGGAGGATATGAGAGAATGACAGCAAAGCCTTCCCCTGCACCGCCCGTGGCGGCGCCCATGAAACCATTAGTCCCAACATTACCCCAAACGCCTTCTTCCGACGCCTCCGATTCTTCCAACGACGACATCATCAAAATCCTAAGAAAGGCGAAATCTTTCAGTGTCCTCATTCGTCTATTGAAAACCACTCAAATTATCAACCAAATCAATTCCCAGCTGATCACAACAAAATCCGGAGGATTAACCATTCTTGCTCCAGACGATGGCGCCTTTTCCCAACTCAAAGCAGGCTTCCTCAATTCTCTCGATGACAATCAAAAGATCGAACTTTTACAGTTCCACGTGTTCCCCATTTACGTTTCCAGCTCCAACTTCGATTCTCTGACCAACCCTGTTCGGACTTTAGCCGGAGCCAACCCCGAGAGGCTTCAGCTGAACGTGACGGCATATGGGAACAGTGTGAACATTTCGACTGGAGTGGTGAATGCGACAATCACGGGCATAGTGTATTCTGATAAGCAGCTTGCGATATACCATGTGGATAAGGTGCTTCTTCCTTTGGATTTCTTTCAGCCCAAGGCGGCGCCGGCTCAGGCGCCCTCTCTGGCGAAGGCGCTGGCGCCTAAAGCTGATAAGGGTGAGTCATCATCGGAAGAAGATGAGGATCAGACAACAAAGCACAACTCTGGTGGCATCAGTTTAACTGCTGTTCAAGGAACAACGTTGGTGTCTCTTGCAGTCGCTTTACTTGCAGCTGCAACCATATGA 789 0.4905 MEEVGFYGGYERMTAKPSPAPPVAAPMKPLVPTLPQTPSSDASDSSNDDIIKILRKAKSFSVLIRLLKTTQIINQINSQLITTKSGGLTILAPDDGAFSQLKAGFLNSLDDNQKIELLQFHVFPIYVSSSNFDSLTNPVRTLAGANPERLQLNVTAYGNSVNISTGVVNATITGIVYSDKQLAIYHVDKVLLPLDFFQPKAAPAQAPSLAKALAPKADKGESSSEEDEDQTTKHNSGGISLTAVQGTTLVSLAVALLAAATI 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0271 262 MobiDBLite consensus disorder prediction 1 46 - -
Sto12g0271 262 MobiDBLite consensus disorder prediction 208 238 - -
Sto12g0271 262 MobiDBLite consensus disorder prediction 19 33 - -
Sto12g0271 262 Gene3D FAS1 domain 31 193 IPR036378 -
Sto12g0271 262 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 33 259 IPR045003 -
Sto12g0271 262 MobiDBLite consensus disorder prediction 218 233 - -
Sto12g0271 262 Pfam Fasciclin domain 59 193 IPR000782 -
Sto12g0271 262 SUPERFAMILY FAS1 domain 53 194 IPR036378 -
Sto12g0271 262 SMART fasc_3 89 194 IPR000782 -
Sto12g0271 262 PANTHER FASCICLIN DOMAIN PROTEIN 33 259 - -
Sto12g0271 262 ProSiteProfiles FAS1/BIgH3 domain profile. 47 191 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0271 Sto-Chr12 1655578 1657395 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0271 - - gmx:100791112 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0271 12 1655578 1657395 Sto12g0271 12 1655578 1657395 ECH