Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0260 ATGAGAAGTAGCAACCACTTGATTGGTGTGGTAAACTTCTTGACGTTCTTGCTGTCGATCCCAATCCTAGGCGGTGGGATATGGCTGAGCAGCAGAGCAAACAACACAGACTGCCTCAAGTTCCTACAGTGGCCCTTGATCGTCATCGGAGTTTGCATCATGGTGGTTTCTCTGGCGGGTTTCGCCGGCGCCTGCTACCGGAACACCTTCCTCATGCGCCTCTACCTCGTCATCATGTTCTTCGTCATCGCCGCACTCATCGGCTTCATCATATTCGCCTACGTCGTCACGGATAAAGGTTCGGGTCGGGTCATGGTGAACCGGGCATACCTGGATTATTACCTGCAGGACTACTCGGGTTGGCTGGAGGAGCGCGTAGCCAGTGATAGCTATTGGGGAAAGATTAGCTCTTGTATTAGGGACTCTAAGGCCTGTGCTAAGATGGGTCGAACCGTTGGTGGTGTGCCTGAAACTGCCGATATGTTCTACCTCCGAAAGCTTTCGCCTATTCAGTCTGGTTGCTGCAAGCCCCCCACAGAGTGTGGGTATGTTTATGAAAACGAGACGATGTGGAACCCAGGGGGAGGACTGGTTGGGACCAACCCTGACTGCACCAGGTGGAGCAATGAGCAAGAGCAACTATGCTATTCATGTGACTCTTGTAAAGCTGGTGTGTTGGCTAGCCTCAAGAAGAGCTGGAGGAGAGTCTCTGTCATCAACATTGTTGTTATGATCATCCTTGTCATTTTTTACATTGTTGCTTATGCTGCTTATCGCAACAACCGTAGGATCGACAACGATGAACCCTCCGGTGAGGCCAGGATGACCAAGGCACAACCTAGCAGAATTCATTTTTAG 858 0.5093 MRSSNHLIGVVNFLTFLLSIPILGGGIWLSSRANNTDCLKFLQWPLIVIGVCIMVVSLAGFAGACYRNTFLMRLYLVIMFFVIAALIGFIIFAYVVTDKGSGRVMVNRAYLDYYLQDYSGWLEERVASDSYWGKISSCIRDSKACAKMGRTVGGVPETADMFYLRKLSPIQSGCCKPPTECGYVYENETMWNPGGGLVGTNPDCTRWSNEQEQLCYSCDSCKAGVLASLKKSWRRVSVINIVVMIILVIFYIVAYAAYRNNRRIDNDEPSGEARMTKAQPSRIHF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0260 285 PANTHER TETRASPANIN-8-RELATED 1 279 IPR044991 GO:0009734|GO:0016021
Sto12g0260 285 PANTHER TETRASPANIN-3-LIKE 1 279 - -
Sto12g0260 285 PRINTS Transmembrane four family signature 6 29 - -
Sto12g0260 285 PRINTS Transmembrane four family signature 39 65 - -
Sto12g0260 285 PRINTS Transmembrane four family signature 66 94 - -
Sto12g0260 285 Pfam Tetraspanin family 6 254 IPR018499 GO:0016021
Sto12g0260 285 MobiDBLite consensus disorder prediction 266 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0260 Sto-Chr12 1565814 1568851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0260 1 277 Miscellaneous Gene Families AT5G60220 72.924 4.93e-134 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0260 - - gmx:100788977 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0994 7 7976569 7983543 Sto12g0260 12 1565814 1568851 CCT
Sto12g0260 12 1565814 1568851 Sto12g0260 12 1565814 1568851 ECH