Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0254 ATGTTAGCACGGGAACCTATTATTCCAGGCACAGATAGACCATTTAAGACAAGCATAGTCTTTTCTTTAGAGGAGGGTCCTGGGGTACTCTTCAAGGCACTTGCTGTTTTTGCACTGCGTCAAATCAACCTCACTAAGATAGAAAGTCGTCCTTTGCGGAAGCAACCTTTACGGGCATCTGACGATAACAACAATGGGCCCAAGTACTTTGATTATCTTTTCTATGTGGATTTTGAAGCATCAATGGCTGATCAGAGTGCACAAAATGCCCTAAGGCACCTAAAGGAGTTCGCTACATTCTTGCGAGTGCTAGGGAGTTATCCAGTGGACACTAGCATGGCATAA 345 0.4435 MLAREPIIPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRKQPLRASDDNNNGPKYFDYLFYVDFEASMADQSAQNALRHLKEFATFLRVLGSYPVDTSMA 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0254 114 Pfam ACT domain 17 55 IPR002912 -
Sto12g0254 114 ProSitePatterns Prephenate dehydratase signature 2. 44 51 IPR018528 GO:0004664|GO:0009094
Sto12g0254 114 ProSiteProfiles ACT domain profile. 18 108 IPR002912 -
Sto12g0254 114 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 1 113 - -
Sto12g0254 114 Gene3D - 11 111 - -
Sto12g0254 114 SUPERFAMILY ACT-like 6 109 IPR045865 -
Sto12g0254 114 CDD ACT_CM-PDT 16 108 - -
Sto12g0254 114 PANTHER AROGENATE DEHYDRATASE 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0254 Sto-Chr12 1532016 1532787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0254 K05359 - rcu:8289746 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0254 12 1532016 1532787 Sto12g0254 12 1532016 1532787 ECH