Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0235 ttgttattatcatcatcagCAGCAGCAGCATCAAATTCCCCCTCAAACTCCAACATCTTCCGAGAATACATAGGAGCGGAATTCAAGAACGTGAAATTCTCGGACGTCCCCATAAACCCCAACGTTGACTTCCACTTCATCCTCTCCTTCGCCATTGACTACGACACCTCATCCTCCCCTTCCCCCACCAACGGCAAATTCAACGTCTTCTGGGACACCCACAACCTCTCCCCCTCCCAAGTCTCCTCCATCAAATCCCAACACTCCAACGTCAAGGTGGCCCTCAGCCTCGCCGGCGACAGCGTGGCAAGCGGCTCCGCCTACTTCCAGCCCTCCTCCGTCGCCTCCTGGCTCTCCAACGCCGTCTCCTCCCTCACCGACATCATCCAACAATACAACCTCGACGGCATCGACATCGACTACGAGCACTTCAAAGCAGACCCGGACACCTTCGCGGAGTGCATTGGACAGCTCATCAAGACGCTCAAGAGTAAGGGAGTGATCAAGTTCGCGTCCATAGCTCCCTTCGCTGAGGATGATGTGGAGAGTCATTACGTGGCGTTGTGGAACAAGTACGGGGAGTACATAGACTATGTGAATTTCCAGTTTTATGCGTATGATGAAGGGACGAGTGTGGATGAGTTTATTGAGTATTTTAATACGCAGAGTGATAAGTATAGTGGGGGGAAGGTGTTGGTGAGTTTTATAAGTGACGGGAGTGGGGGGTTGTCTCCTTCCAATGGATTCTTCACTGCGTGTCATAGGTTGAAGACTCAGCAAAAGCTTCATGGCATCTTTGTCTGGTCTGCTGATGACTCCAAGGCTAATGGGTTCCGTTATGAGGAGCAATCACAAGCCTTGTTGGCTCTTCActag 876 0.5046 LLLSSSAAAASNSPSNSNIFREYIGAEFKNVKFSDVPINPNVDFHFILSFAIDYDTSSSPSPTNGKFNVFWDTHNLSPSQVSSIKSQHSNVKVALSLAGDSVASGSAYFQPSSVASWLSNAVSSLTDIIQQYNLDGIDIDYEHFKADPDTFAECIGQLIKTLKSKGVIKFASIAPFAEDDVESHYVALWNKYGEYIDYVNFQFYAYDEGTSVDEFIEYFNTQSDKYSGGKVLVSFISDGSGGLSPSNGFFTACHRLKTQQKLHGIFVWSADDSKANGFRYEEQSQALLALH 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0235 291 PANTHER CHITINASE 2-LIKE 7 289 - -
Sto12g0235 291 PRINTS 2-S globulin family signature 17 30 IPR000677 -
Sto12g0235 291 PRINTS 2-S globulin family signature 64 79 IPR000677 -
Sto12g0235 291 PRINTS 2-S globulin family signature 251 270 IPR000677 -
Sto12g0235 291 PRINTS 2-S globulin family signature 81 99 IPR000677 -
Sto12g0235 291 CDD GH18_narbonin 19 273 - -
Sto12g0235 291 SUPERFAMILY (Trans)glycosidases 16 283 IPR017853 -
Sto12g0235 291 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 18 291 IPR001223 GO:0005975
Sto12g0235 291 PANTHER 2, PUTATIVE, EXPRESSED-RELATED 7 289 - -
Sto12g0235 291 Pfam Glycosyl hydrolases family 18 45 208 IPR001223 GO:0005975
Sto12g0235 291 Gene3D Glycosidases 16 291 - -
Sto12g0235 291 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 134 142 IPR001579 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0235 Sto-Chr12 1405491 1406366 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0235 - - twl:119991934 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0235 12 1405491 1406366 Sto12g0235 12 1405491 1406366 ECH