Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0182 ATggcttcttcttcctcaaacTCTCCTCTCGTACTCGCTCTGACTTCCTTCTTCATCCTCGCCTCTCTCACCAATGGCGCCATCTTGACGCTCGTTAACAACTGCAATTACACCGTCTGGCCCGCCATCCAGCCCAACGCCGGCCACCCTGTCCTCGCTCGCGGGGGCTTCGTCCTCCACACCCTCACCCACGTCTCCATACCCATACCCGATCACCACTGGTCGGGGCGGGTCTGGGCCCGAACCGGTTGCGGATACTCCAACAACCAGTTCCACTGCAGCACCGGCGACTGCGGTGGGCGCCTGGAGTGCAACGGCGCCGGCGGAGTGACTCCGGCGACTCTGGCCCAGTTTAGCGTCCACCACGGTAATAACGACTTCACGTCTTACAGCGTTAGCCTGGTAGACGGTTTTAACGTGCCCATGACGGTGACCCCACACGAGGGAAAAGGAGTGTGTCCTGTGGTGGGTTGTCGCGTGGATCTGGTAGCCACGTGTCCTCCAGCATTGCAGCACCGTGCAGCGGAGGGTAAGGGGCGCGTGGTGGCGTGTAAGAGTGGGTGCGAGGCTCTTAGGACGGACGAGTTGTGCTGTAGGAACCATTATAATAGCCCACAAGCGTGTAAGCCTTCAATTTACTCGCAGTTCTTCAAGCATGCGTGTCCCGCTACCTTCACTTTTGCTCATGACAACCCATCGCTTATGCACGAGTGTTCATCGCCACGCGAACTCAAGGTTATATTTTGCCACTGA 753 0.5684 MASSSSNSPLVLALTSFFILASLTNGAILTLVNNCNYTVWPAIQPNAGHPVLARGGFVLHTLTHVSIPIPDHHWSGRVWARTGCGYSNNQFHCSTGDCGGRLECNGAGGVTPATLAQFSVHHGNNDFTSYSVSLVDGFNVPMTVTPHEGKGVCPVVGCRVDLVATCPPALQHRAAEGKGRVVACKSGCEALRTDELCCRNHYNSPQACKPSIYSQFFKHACPATFTFAHDNPSLMHECSSPRELKVIFCH 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0182 250 PIRSF PR5 1 250 IPR001938 -
Sto12g0182 250 Gene3D Thaumatin 27 249 IPR037176 -
Sto12g0182 250 PANTHER OS03G0233200 PROTEIN 11 250 IPR001938 -
Sto12g0182 250 Pfam Thaumatin family 33 249 IPR001938 -
Sto12g0182 250 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Sto12g0182 250 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Sto12g0182 250 PRINTS Pathogenesis-related protein signature 128 144 IPR001938 -
Sto12g0182 250 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Sto12g0182 250 CDD TLP-PA 28 249 - -
Sto12g0182 250 ProSiteProfiles Thaumatin family profile. 26 250 IPR001938 -
Sto12g0182 250 SUPERFAMILY Osmotin, thaumatin-like protein 27 249 IPR037176 -
Sto12g0182 250 SMART tha2 29 250 IPR001938 -
Sto12g0182 250 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 11 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0182 Sto-Chr12 1083045 1083797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0182 1 249 Receptor kinase-like Gene Family AT5G38280 35.827 9.72e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0182 - - gmx:100818233 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0182 12 1083045 1083797 Sto12g0182 12 1083045 1083797 ECH