Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0130 ATGGCAGAGGCAAGCGTAGGTGGGAGAAGCAGCAGATGGTCTCTTCAGGGAATGACAGCTCTTGTTACTGGTGGAACTAAAGGAATTGGgTATGGAATTGTGGAGGAGTTGGCAGAATTAGGGGCGTGTGTATACACATGCTCAAGGAATAAAGCTGAGCTTAACGAGTGCTTACAACAATGGGCCATAAAAGGCTTTCAAGTTACTGGTTCTGTTTGTGACATTGTGTCTTCTACACAGAGAAACGACCTCATAACTAAAGTCTCCTCTGTCTTTAATGGCAAACTCAATATCCTTgtaaaCAACGTTGGAGCAAACCTATGGAAACCGACCCTGGAATTTACAGAGGAAGACTTCTCATTTTTGGTGAGTACAAATCTAGAATCAGCATACCATATTACACAACTTGCGCATCCTCTTCTAAAGGCTTCTCAAGCTGCAAGCATCGTTTTCATATCTTCCATTGCCGGTGTGGTATCTATAAATATAGGATCCATATATGGTGCAGCCAAagGAGCAATCAACCACCTGACCAAAAATCTGGCGTGTGAGTGGGCAAAAGACAACATAAGGACTAATTGCGTTGCGCCAGGGACTATTAAGACACCCCTGGCCGAACCCTACTTGAAAGATGAAACGTTTGTTGAGAAGTACATGAGAAGAACCCCTCTGGGACGATTTGGAGAGGTGAAGGAGGTGTCTTCCACGGTGGCATTCCTCTGCTTGCCTGCCGCCTCTTACATAACGGGACAGACCATCTGTGTTGACGGAGGATTAACAGTCTTGGGTTTCTAA 795 0.4478 MAEASVGGRSSRWSLQGMTALVTGGTKGIGYGIVEELAELGACVYTCSRNKAELNECLQQWAIKGFQVTGSVCDIVSSTQRNDLITKVSSVFNGKLNILVNNVGANLWKPTLEFTEEDFSFLVSTNLESAYHITQLAHPLLKASQAASIVFISSIAGVVSINIGSIYGAAKGAINHLTKNLACEWAKDNIRTNCVAPGTIKTPLAEPYLKDETFVEKYMRRTPLGRFGEVKEVSSTVAFLCLPAASYITGQTICVDGGLTVLGF 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0130 264 Pfam Enoyl-(Acyl carrier protein) reductase 26 260 - -
Sto12g0130 264 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 154 182 IPR020904 GO:0016491
Sto12g0130 264 PANTHER TROPINONE REDUCTASE 3 264 IPR045000 GO:0016491
Sto12g0130 264 Gene3D - 4 263 - -
Sto12g0130 264 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Sto12g0130 264 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Sto12g0130 264 PRINTS Glucose/ribitol dehydrogenase family signature 141 157 IPR002347 -
Sto12g0130 264 PRINTS Glucose/ribitol dehydrogenase family signature 167 186 IPR002347 -
Sto12g0130 264 PRINTS Glucose/ribitol dehydrogenase family signature 188 205 IPR002347 -
Sto12g0130 264 PRINTS Glucose/ribitol dehydrogenase family signature 223 243 IPR002347 -
Sto12g0130 264 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 3 264 - -
Sto12g0130 264 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 262 IPR036291 -
Sto12g0130 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Sto12g0130 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 IPR002347 -
Sto12g0130 264 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0130 Sto-Chr12 837611 838742 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0130 12 264 Miscellaneous Gene Families AT2G29290 64.822 9.39e-119 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0130 K08081 - gmx:100780806 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0130 12 837611 838742 Sto12g0130 12 837611 838742 ECH