Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0126 ATGGCGCATAGAGTAGATCAGGAGTATGACTATCTGTTCAAGATCGTTTTGATCGGGGACTCTGGTGTCGGCAAATCCAACATTCTTTCCAGGTTCACTCGAAATGAGTTTTGCTTGGACTCCAAATCTACCATTGGAGTTGAGTTCGCTACCAGGACTCTTCAGgacttaCTCATCCTATTTCTTTATGCTTCTCCTTATTGTAAACAGGTGGAAGGAAAGACTGTTAAGGCACAAATCTGGGACACGGCAGGGCAGGAGCGGTACCGTGCCATCACCAGTGCTTATTATAGAGGGGCTGTGGGTGCACTCCTCGTATATGACATAACTAAGAGGCAAACCTTTGACAATGTCCAGAGGTGGCTCCGTGAATTGAGGGACCATGCAGATTCTAATATAGTTATCATGATGGCTGGAAATAAGTCTGATTTAACTCATCTTAAAGCAGTTTCAGAAGATGATGGTCAGGCATTGGCAGAGAAGGAAGGTCTCTCATTTCTTGAGACTTCTGCACTGGACGCAACTAACATTGAGAAGGCATTCCACACCATTTTGACCGAGATCTATCATATTGTAAGCAAAAAAGCACTGGCAGCTCAGGAAGCAGCTGCAAATACTACACTTCCTACCCAAGGAACCACCATCAATGTTGCAGATGCATCGGGGAATACCAAAAGAAGCTGCTGTTCCACCTAA 696 0.4468 MAHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQDLLILFLYASPYCKQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLTHLKAVSEDDGQALAEKEGLSFLETSALDATNIEKAFHTILTEIYHIVSKKALAAQEAAANTTLPTQGTTINVADASGNTKRSCCST 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0126 231 PRINTS Transforming protein P21 ras signature 13 34 - -
Sto12g0126 231 PRINTS Transforming protein P21 ras signature 36 52 - -
Sto12g0126 231 PRINTS Transforming protein P21 ras signature 69 91 - -
Sto12g0126 231 PRINTS Transforming protein P21 ras signature 131 144 - -
Sto12g0126 231 PRINTS Transforming protein P21 ras signature 166 188 - -
Sto12g0126 231 TIGRFAM small_GTP: small GTP-binding protein domain 67 184 IPR005225 GO:0005525
Sto12g0126 231 ProSiteProfiles small GTPase Rho family profile. 6 203 - -
Sto12g0126 231 ProSiteProfiles small GTPase Rab1 family profile. 8 229 - -
Sto12g0126 231 Pfam Ras family 14 189 IPR001806 GO:0003924|GO:0005525
Sto12g0126 231 SMART rho_sub_3 15 187 IPR001806 GO:0003924|GO:0005525
Sto12g0126 231 PANTHER - 1 231 - -
Sto12g0126 231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 193 IPR027417 -
Sto12g0126 231 ProSiteProfiles small GTPase Ras family profile. 6 231 IPR001806 GO:0003924|GO:0005525
Sto12g0126 231 SMART rab_sub_5 13 191 - -
Sto12g0126 231 SMART ran_sub_2 18 231 - -
Sto12g0126 231 Gene3D - 5 229 IPR027417 -
Sto12g0126 231 CDD Rab11_like 10 189 - -
Sto12g0126 231 PANTHER RAS-RELATED PROTEIN RABA2D 1 231 - -
Sto12g0126 231 SMART ras_sub_4 10 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0126 Sto-Chr12 821391 822652 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0126 K07904 - gmx:100799021 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0126 12 821391 822652 Sto12g0126 12 821391 822652 ECH