Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0111 ATGGCTGAGAAAGGGAATCTGTATTCACCAGGAGATGGGAGGAGAAtactaattttcaatttcttcaaGGATGCCGGACTGGTTTTTAAATCCGACAGTCTTGGTCGGGAAATATTGTCCATCGCATTGCCCGCAGCACTGGCTTTGACAGCCGACCCTATTGCTTCACTAGTTGACACAGCATTCATCGGCCAAATAGGTCCTGTGGAGCTTGCTGCTGTGGGAGTTTCCATAGCTCTGTTTAATCAGGTGTCAAGGATTGCAATATTCCCACTTGTCAGTATCACAACTTCTTTTGTGGCTGAGGAAGATACCATCAGCAGCGTGAGGCCTGAAGTGGAGGAGAATGATAACTTGGAAGAAGGTCCACCTATGGATGGTGAAACCAAAGAGTTCATACCACAAAAAGACACAGGTGCAGATGTTCACAACTCAGATTCTGTCCATGATAGCTTTAATGTAGTTAATGCTGAGTGTAAGAGAAGGATTATCCCTTCAGCTTCATCAGCATTAGTTATTGGTGGCATCCTTGGCATCATCCAGGCAATATTCCTCATATCTGCGGCAAAACCTTTATTGAACTTCATGGGAGTAAAATCTGATTCCCCTATGCTAAACCCAGCAAAGCAGTACCTGACATTAAGGTCCCTTGGTGCTCCTGCAGTTCTTCTCTCATTAGCTATGCAGGGAGTCTTCCGAGGATTGAAAGACACGAAAACTCCTTTATATGCTACAGTGGCTGGAGATATTACCAATATAGCTCTTGATCCTCTCTTCATGTTTGTATTCCGCCTGGGTGTCAGTGGTGCAGCCATTGCCCATGTTATATCTCAGTACCTAATTTCAATTATACTGCTGGGGAAGTTGATAAAACAGGTTGATCTTATACCTCCAAGCAAGAAGCATCTGCAGTTTGATCGATTCCTTAAAAATGGTTTCCTATTATTAATGAGAGTCATTGCTGTAACATTCTGTGTGACACTTTCTGCATCATTAGCAGCACGCCAGGGATCAACATCTATGGCTGCATTTCAAGTTTGCCTGCAGGTTTGGTTGGCAACGTCTCTTCTTGCCGATGGTCTGGCTGTCGCTGGGCAGGCAATTCTTGCTGGTGCATTTGCTAATAAGGACCAAGACAAGGCTATAGCAACTGCTTCCCGAGTACTGCAGATGGCAGTGGTTCTGGGATTGCTACTTGCGTTCTTTCTTGGAACAGGGTTGCATTTTGGAGCTAAAATATTTACAAGAGATGTCAATGTGCTCCGCCTTATTAGTATTGGAATTCCGTTTGTTGCAGCCACTCAGCCCATCAATTCTCTAGCATTTGTATTTGATGGTGTCAACTTTGGGGCATCTGATTTTGCATATTCAGCCTTCTCCATGGTTCTGGTGGCAATTGTTAGCATCATTTCTCTACTTGTGCTGTCCTCAGCTGGTGGTTTCATTGGTATTTGGGTTGCTTTGACCCTTTATATGAGTCTTAGGGCATTTGCCGGCTTCTTGAGGATTGGAACGGGTTCAGGGCCTTGGGAGTTCCTTAGGAGCTGA 1548 0.4432 MAEKGNLYSPGDGRRILIFNFFKDAGLVFKSDSLGREILSIALPAALALTADPIASLVDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSITTSFVAEEDTISSVRPEVEENDNLEEGPPMDGETKEFIPQKDTGADVHNSDSVHDSFNVVNAECKRRIIPSASSALVIGGILGIIQAIFLISAAKPLLNFMGVKSDSPMLNPAKQYLTLRSLGAPAVLLSLAMQGVFRGLKDTKTPLYATVAGDITNIALDPLFMFVFRLGVSGAAIAHVISQYLISIILLGKLIKQVDLIPPSKKHLQFDRFLKNGFLLLMRVIAVTFCVTLSASLAARQGSTSMAAFQVCLQVWLATSLLADGLAVAGQAILAGAFANKDQDKAIATASRVLQMAVVLGLLLAFFLGTGLHFGAKIFTRDVNVLRLISIGIPFVAATQPINSLAFVFDGVNFGASDFAYSAFSMVLVAIVSIISLLVLSSAGGFIGIWVALTLYMSLRAFAGFLRIGTGSGPWEFLRS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0111 515 TIGRFAM matE: MATE efflux family protein 44 485 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto12g0111 515 Pfam MatE 161 258 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto12g0111 515 Pfam MatE 317 470 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto12g0111 515 MobiDBLite consensus disorder prediction 111 145 - -
Sto12g0111 515 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 15 514 IPR044644 -
Sto12g0111 515 PANTHER PROTEIN DETOXIFICATION 43 15 514 - -
Sto12g0111 515 MobiDBLite consensus disorder prediction 111 137 - -
Sto12g0111 515 CDD MATE_DinF_like 34 505 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0111 Sto-Chr12 746011 750176 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0111 K03327 - gmx:100170750 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0111 12 746011 750176 Sto12g0111 12 746011 750176 ECH