Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0107 ATGGTGCAGTATAACTTTAAGAAGATTACTGTGGTACCAAATGGGAAGGATTTCATTGACATCATCCTTTCTCGCACTCAGCGTCAAACACCAACTGTTGTGCATAAAGGATATGCAATTTCCCGTCTCCGTCAATTTTATATGCGCAAAGTAAAGTATACCCaacaaaattttcatgaaaagcTCTCCACTATCATTGATGAGTTCCCTCGGCTTGATGATATTCACCCATTCTATGGTGATCTACTCCATGTACTTTACAACAAGGACCATTACAAGCTTGCTCTCGGTGACTCATTATATAGGTGCAAGTGTCTGAAGGTGGCTGCACTTGGTCGCATGTGCACTGTGATTAAGAGAATTGGCCCCAGTTTAGCTTACCTAGAGCAGGTTAGACAACACATGGCGAGGCTCCCATCAATAGATCCAAATACAAGAACTATCTTGATTTGTGGTTACCCCAATGTTGGCAAGAGCTCATTCATTAACAAAATTACAAGAGCTGATGTGGATGTGCAGCCCTATGCCTTCACTACAAAGTCACTTTTTGTTGGTCATACAGACTACAAATACCTAAGGTACCAAGTAATTGATACGCCGGGGATTTTGGACCGGCCATTTGAAGATCGTAATATTATTGAGATGTGCAGTATCACTGCTCTAGCTCATTTGCGAGCTGCTATCTTGTTTTTCCTCGACATATCTGGATCTTGTGGTTATAGTATTGCACAGCAGGCAGCTCTATTTCACAGCATTAAGTCTCTGTTTATGAACAAGCCATTAATACTAGTCTGCAACAAGACTGATTTGCAACCACTGGAGGGGATATCTGAGGAAGACATGAAGTTGGTCATGGAGATGAAAGCTGAAGCCTTGAAGACTGTAGTTGGTCAAGGAGGCGAGCCTACAAATGATGACAGTGTGTTGTTGACTATGAGCACTTTGACAGAAGAGGGGGTAATTGCTGTAAAAAATGCAGCATGTGAGAGACTATTAAATCAAAGGGTGGAGATAAAGATGAAATccaaaaagataaatgactgcTTGAATAGATTTCATGTTGCAATGCCAAAACCACGTGACCAGAAGGAAAGGCCGCCTTGTATTCCCCCAGCAGTCTTAGAAGCTAAGGCTAGGCAAGCGGCagagaaggaaaagagaaaaactGAGAAGGATTTGGAGAACGAGAATGGTGGCGCAGGTGTTTACTCGGCGAGCTTGCGAAAGAACTATATTTTAGCTAATGATGAATGGAAAGAAGATGTACTGCCAGAAATTTTGGATGGACACAATGTGTATGATTTCATCGATCCTGATATTCTGAATAGGCTTGAAGAATTAGAAAGGGAAGATGGGCTAAGACAGGCTGAGGAAGTAGATGATGATTTTGAGATAGATGGAAATGAGTTGACACCAGAACAGCAGGAAGCTTTAGCTGTGATcaggaaaaagaaaagtttgCTCATCCAAGAGCACAGGATGAAGAAGAGTACTGCAGAGAGCCGGCCAATTGTTCCAAGAAAATTTGATAAGGACAAGAAGTTCACATCAGAAAGAATGGGGAGGCAGCTATCATCTTTGGGGCTTGATCCTTCTTTGGCAATTGACAGAGCACGCAGCAGATCTGTATCTAGGAGAGGCCGAAAAAGGGAAAGATCGCCTGAAAGGGGAGCTGATGGTGGTGCAGATGTGATGGATATAGATGTTGACTCATCTAGCAAGAAGCAGCGTATTAGGTCTATATCAAGGTCCAGGTCAGTTTCACGCCCACCATCGGAAGTTGTGCCTGGAGAGGGCTTCAAGGATTCTGCTCAAAAGATCAAGGCAATAAAGCTTGCCAAGAAATCTGTCAAGAAGAGAAACAAGGATGCTCGTCGTGGAGAAGCTGATAGAGTTATTCCTACTTTGAAACCCAAGCACTTGTTTTCCGGGAAGCGCTCTATTGGAAAAACTGATAGACGGTGA 1965 0.4158 MVQYNFKKITVVPNGKDFIDIILSRTQRQTPTVVHKGYAISRLRQFYMRKVKYTQQNFHEKLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGDSLYRCKCLKVAALGRMCTVIKRIGPSLAYLEQVRQHMARLPSIDPNTRTILICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAILFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLILVCNKTDLQPLEGISEEDMKLVMEMKAEALKTVVGQGGEPTNDDSVLLTMSTLTEEGVIAVKNAACERLLNQRVEIKMKSKKINDCLNRFHVAMPKPRDQKERPPCIPPAVLEAKARQAAEKEKRKTEKDLENENGGAGVYSASLRKNYILANDEWKEDVLPEILDGHNVYDFIDPDILNRLEELEREDGLRQAEEVDDDFEIDGNELTPEQQEALAVIRKKKSLLIQEHRMKKSTAESRPIVPRKFDKDKKFTSERMGRQLSSLGLDPSLAIDRARSRSVSRRGRKRERSPERGADGGADVMDIDVDSSSKKQRIRSISRSRSVSRPPSEVVPGEGFKDSAQKIKAIKLAKKSVKKRNKDARRGEADRVIPTLKPKHLFSGKRSIGKTDRR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0107 654 Pfam NOGCT (NUC087) domain 387 440 IPR012973 -
Sto12g0107 654 MobiDBLite consensus disorder prediction 492 519 - -
Sto12g0107 654 MobiDBLite consensus disorder prediction 614 654 - -
Sto12g0107 654 Coils Coil 379 399 - -
Sto12g0107 654 MobiDBLite consensus disorder prediction 548 577 - -
Sto12g0107 654 MobiDBLite consensus disorder prediction 492 600 - -
Sto12g0107 654 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 1 97 - -
Sto12g0107 654 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 97 654 - -
Sto12g0107 654 Pfam Nucleolar GTP-binding protein 1 (NOG1) 213 269 IPR010674 GO:0005525
Sto12g0107 654 PIRSF NOG1 1 98 IPR024926 -
Sto12g0107 654 PIRSF NOG1 96 654 IPR024926 -
Sto12g0107 654 Gene3D - 99 138 - -
Sto12g0107 654 Gene3D - 3 98 - -
Sto12g0107 654 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 146 332 IPR031167 GO:0005525
Sto12g0107 654 Pfam NOG1 N-terminal helical domain 6 98 IPR041623 -
Sto12g0107 654 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 289 IPR027417 -
Sto12g0107 654 CDD NOG 146 332 - -
Sto12g0107 654 Gene3D - 139 350 IPR027417 -
Sto12g0107 654 PRINTS GTP1/OBG GTP-binding protein family signature 148 168 IPR006073 GO:0005525
Sto12g0107 654 PRINTS GTP1/OBG GTP-binding protein family signature 169 187 IPR006073 GO:0005525
Sto12g0107 654 PRINTS GTP1/OBG GTP-binding protein family signature 196 211 IPR006073 GO:0005525
Sto12g0107 654 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 97 654 - -
Sto12g0107 654 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0107 Sto-Chr12 723293 725326 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0107 K06943 - jre:108998713 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0107 12 723293 725326 Sto12g0107 12 723293 725326 ECH