Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0106 ATGCAGATTAGATGCAGGAGCACAACTACTGAGACAATGGGAACCACAATATCTCACCCTTTCTGCTCGTGCTCCGCAGCGTCGCGAGTCTCTGGTGTGTGTGAAGTAGCGAGCTTGAGTGACTTGGAAGAGACAGAAGCTGGAGGCGGCACAGCTCTCCAAACGGACTCTAACAACATCGAAGAGAAGGGTATAACAAGGGTTCAGGGATGCCTAGGCAGTGCCAACTctgaagaggaggaagaaggactTGAGGAATTTGAAGACAAAGACGAAATTGATGATTCTGACAGCGACAATTTTGATGTCGATGTCACCGCGCTTGAGGAAGAAGCAAAGGACGCAGTCCGAGACTATTCAAGCTCTTTATctcgcattttgaaaatagATGACGAGATAAATGACCACAAGGAAACAGCTCGAACGCAGAAGAGGGATAAAGGTAGAACAAGCAACGTCCCTGACAATCTTCTCCCAAGGGTTGCAATTCTTGGAAGGCCTAATGTTGGCAAATCAGCATTATTTAATCGTCTTGTTGGGGGAAACAAGGCCATTGTGGTGGATGAACCTGGGGTTACTAGGGATCGCTTATATGGTAGATCATTTTGGGGAGACCATGAATTCATGGTAGTGGACACAGGTGGGGTTCTCACTATTTCAAAATCACAAGCTAGTGTTATGGAAGAGCTGGCTATTAGTACTACCATTGGCATGGATGGTATTCCACTTGCCTCTAGAGAGGCAGCTGTTGCCAGGATGCCCTCAATGATTGAGAGACAAGCCATCGCAGCTGTAGAAGAATCATCTGTCATTATTTTCCTAGTTGATGGCCAGGTAGGTCTAATGGCAGCTGATGTGGAGATTGCTGATTGGTTACGTAAGCACTACTCCAGTAAATTTGTAATTCTTGCAGTTAACAAGTGCGAATCTCCACGAAAAGGAGTTATGCAAGCATCTGAATTTTGGTCTCTTGGATTTGAACCAATTCCTGTGTCGGCTATATCGGGGACTGGAACTGGAGTGCTTCTTGACCTTGTTTGTTCAGGCCTGAAAAAAATTGAGGAGTCAGAGAATCTGGATGAGGAAGAAGATTATGTTCCTGCAATGTCAATTGTTGGCAGACCTAATGTTGGAAAGAGTAGCATTTTGAATGCGTTAATTGGTGAGGACAGAACAATAGTCAGCCCCATCAGTGGCACTACCCGTGATGCTATTGATACTGAGTTTACTGGAGCAGATGGCCAGAAGTTTCGTCTTATTGATACTGCTGGAATCAGGAAAAGGGCAGCCATAGCCTCAGCAGGTAGTATGACCGAGGCTTTGTCAGTGAATCGGGCTTTTCGGGCTATTCGCCGTTCTGATGTTGTTGCTCTTGTCATTGAGGCCATGGCTTGTATCACAGAACAGgactacAAGATTGCTGAAAGGATTGAAAAAGAAGGGAAAGGTTGCGTGATTGTTGTAAATAAATGGGATACTATACCAAATAAGAACCAGCAGACTGCAACATACTATGAGCAAGATGTCAGGGAGAAACTTCGTTTACTTGACTGGGCTCCAATTGTTTATTCTACTGCATTAGCAGGTCATAGTGTTGACAAGGTTATTGTTGCTGCTAGTGCAGTTGAAAAGGAGAGATCAAGAAGGCTTAGTACTGCTATATTGAATCAAGTAGTGCAGGAAGCAATAGCTTTTAAGCCACCTCCCAGGACACGAGGTGGAAGAAGAGGGCGAATTTACTACTGCACTCAGGCCGCTATAAGGCCACCTACGTTTGTTTTCTTTGTGAATGATGCAAAACTTTTTCCTGAGACTTACCGCCGCTATATGGAGAAGCAACTGCGCACAGATGCAGGTTTTTCGGGTACACCCATTCGGCTTCTGTGGCGCAGTAGAAGGAAAATGGGAAAAGATGAAGGCAAAGCAAACCTTCCATCACGTGATCGAAAATTGGTATCAACAAGAGTGTAG 1971 0.4404 MQIRCRSTTTETMGTTISHPFCSCSAASRVSGVCEVASLSDLEETEAGGGTALQTDSNNIEEKGITRVQGCLGSANSEEEEEGLEEFEDKDEIDDSDSDNFDVDVTALEEEAKDAVRDYSSSLSRILKIDDEINDHKETARTQKRDKGRTSNVPDNLLPRVAILGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSFWGDHEFMVVDTGGVLTISKSQASVMEELAISTTIGMDGIPLASREAAVARMPSMIERQAIAAVEESSVIIFLVDGQVGLMAADVEIADWLRKHYSSKFVILAVNKCESPRKGVMQASEFWSLGFEPIPVSAISGTGTGVLLDLVCSGLKKIEESENLDEEEDYVPAMSIVGRPNVGKSSILNALIGEDRTIVSPISGTTRDAIDTEFTGADGQKFRLIDTAGIRKRAAIASAGSMTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYKIAERIEKEGKGCVIVVNKWDTIPNKNQQTATYYEQDVREKLRLLDWAPIVYSTALAGHSVDKVIVAASAVEKERSRRLSTAILNQVVQEAIAFKPPPRTRGGRRGRIYYCTQAAIRPPTFVFFVNDAKLFPETYRRYMEKQLRTDAGFSGTPIRLLWRSRRKMGKDEGKANLPSRDRKLVSTRV 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0106 656 CDD EngA1 162 350 - -
Sto12g0106 656 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 367 547 IPR031166 GO:0005525
Sto12g0106 656 TIGRFAM GTPase_EngA: ribosome-associated GTPase EngA 252 629 IPR016484 GO:0005525
Sto12g0106 656 TIGRFAM small_GTP: small GTP-binding protein domain 369 535 IPR005225 GO:0005525
Sto12g0106 656 CDD EngA2 369 542 - -
Sto12g0106 656 PANTHER GTP-BINDING PROTEIN 137 639 - -
Sto12g0106 656 Pfam 50S ribosome-binding GTPase 160 307 IPR006073 GO:0005525
Sto12g0106 656 Pfam 50S ribosome-binding GTPase 370 490 IPR006073 GO:0005525
Sto12g0106 656 PRINTS GTP1/OBG GTP-binding protein family signature 161 181 IPR006073 GO:0005525
Sto12g0106 656 PRINTS GTP1/OBG GTP-binding protein family signature 258 276 IPR006073 GO:0005525
Sto12g0106 656 Pfam KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 549 630 IPR032859 -
Sto12g0106 656 Gene3D - 364 546 IPR027417 -
Sto12g0106 656 Gene3D - 549 633 IPR015946 -
Sto12g0106 656 Gene3D - 161 355 IPR027417 -
Sto12g0106 656 Hamap GTPase Der [der]. 158 633 IPR016484 GO:0005525
Sto12g0106 656 PANTHER GTPASE DER 137 639 - -
Sto12g0106 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 327 636 IPR027417 -
Sto12g0106 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 353 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0106 Sto-Chr12 716060 722884 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0106 - - gmx:100777588 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0106 12 716060 722884 Sto12g0106 12 716060 722884 ECH