Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0080 ATGGAGATCAACGCGCTGGCGCGTGAGGCATTGATCAACGCAAATGGAATCATAGAGTCTTGCTTCTCTCCTGCCAAATACTCCATCCTCCTTAGCTCCGTTGCCTACGACAAACTGTGGCAGTTCAACTTGCAAGGCCTTCCCGCTGATCTCATCCATAGGGGTTTAGCCGTGGAAGACCCCAATTCTCCCCACGGCTTAAAGCTAAGCATTCAAGACTACCCCTACGCCAACGATGGCCTCGTGCTTTGGGACGCCATCAGAGAATGGATCACGGCTTATGTCAACCACTACTACCCTGACCCCACTCTTGTTGAATCCGACTCCGAGATCCAGGCctggtgggaggagatccgaaCCAAGGGCCACGCCGACAAAAAGGACGAGCCATGGTGGCCCCAACTGAAGAGCCCGAAGGATCTTATTGAAATCCTGACCACCATTGTGTGGATAACGTCGGGGCACCACGCAGCGGTTAACTTCGGGCAGTACACGTATGCGGGGTATTTCCCTAACCGCCCAACCATTGCTCGAACAAATATGCCGACGGAGGATAGGGATGAGGCGGAGTGGGAATTGTTCTTGCAGAAACCGGAGGTGACGCTGCTAAAGTGCTTTCCGTCGCAAGTACAAGCGACGACGGTGATGTCGGTGCTGGACATCCTGTCGAATCACTCGCCGGACGAGGAGTATCTGGGGAATCACATAGAGGCGTCATGGGAGGAGGATGTGGTGGTGAAAGCGGCGTTTGAGAAGTTTCAAGGGAGGTTGAAGGAGCTGGAGGGGTTGATTGATTTGAGGAATGCGGATAGGAATCTCAAGAACCGAAACGGCGCTGGGATTGTGCCCTATGAGTTGTTGAAGCCGGTTTCCGAGCCGGGAGTGACGGGACAGGGAGTTCCATTTAGTATCTCCATTTGA 921 0.5244 MEINALAREALINANGIIESCFSPAKYSILLSSVAYDKLWQFNLQGLPADLIHRGLAVEDPNSPHGLKLSIQDYPYANDGLVLWDAIREWITAYVNHYYPDPTLVESDSEIQAWWEEIRTKGHADKKDEPWWPQLKSPKDLIEILTTIVWITSGHHAAVNFGQYTYAGYFPNRPTIARTNMPTEDRDEAEWELFLQKPEVTLLKCFPSQVQATTVMSVLDILSNHSPDEEYLGNHIEASWEEDVVVKAAFEKFQGRLKELEGLIDLRNADRNLKNRNGAGIVPYELLKPVSEPGVTGQGVPFSISI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0080 306 Pfam Lipoxygenase 1 289 IPR013819 GO:0016702|GO:0046872
Sto12g0080 306 PANTHER LINOLEATE 13S-LIPOXYGENASE 2-1, CHLOROPLASTIC 1 305 - -
Sto12g0080 306 PANTHER LIPOXYGENASE 1 305 IPR000907 GO:0016702|GO:0046872
Sto12g0080 306 Gene3D - 1 305 - -
Sto12g0080 306 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 1 306 IPR013819 GO:0016702|GO:0046872
Sto12g0080 306 SUPERFAMILY Lipoxigenase 1 306 IPR036226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0080 Sto-Chr12 536127 537047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0080 1 306 Acyl Lipid Metabolism Gene Families AT3G45140 63.725 8.61e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0080 K00454 - qsu:111990533 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0080 12 536127 537047 Sto12g0080 12 536127 537047 ECH