Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0076 ATGATTGAATCAGTGAGTATGGACATCACATACGAATATGGCAGTGCCTCCCTTAACCGGAGCAGTTTCCCACACGGTTTTATCTTTGGGACAGCATCATCTTCTTACCAGTATGAAGGCGCAGCGCATGTTGGAGGCAAAGGACCAAGCATATGGGATGCTTACACTCATAAACATCCAGAAAGGATAAAGGACAGGAGTAACGGAGATGTGGCCGTTGATGAATACCACCGCTACAAGGAAGATGTCAGGATCATGAAGGAAATGAATTGGGACGCTTATAGGTTCTCCATCTCTTGGTCTAGAATTTTGCCTAAAGGAAAGATCAGTGGAGGTGTGAACAAGGAAGGAATCAAGTACTACAATAATCTCATCGATGAGCTTCTAGCTAACGGTATAGAACCATCCGTGACACTTTTCCATTGGGATCTTCCTGAGAGCTTGGAAGAAGAATACGGTGGCTTTTTAAGTCCGAAAATAGTAAAAGATTTTGGAGATTATGCGGAGTTATGCTTCAAGGAATTTGGAGAAAAAGTAAAGCATTGGATTACATTAAACGAACCATGGAGTTACAGCTCAGATGGGTATGCAACAGGAGAGATAGCACCAGGGCGATGTTCAAACCCAAAAAAGTGTCTTAATGGAGATTCAGGCACTGAGCCATACATCGTGTCCCACCACTTCTTACTTTCTCATGCTTTCGCAGTCAACATCTACAGAACCAAGTTTCAGGCATCTCAAAAGGGTTTGATAGGGATTTCACTAGCGTGTAAGTGGATGGTCCCATACTCTGACTCTCAGTTGGACTCTGAAGCTGCTGAGACAGCTCGTGATTTTATGTATGGATGGTACATGGAACCATTGAGCAGTGGAGATTACCCAAAATCTATGCGATGTTTGGTGGGAAGTCGATTGCCCAAGTTCTCAGAAAAGCAAAGAAAGTTACTTATTGGATCCTTTGACTTCATTGGATTAAATTACTACACCTCCCTTTATGCTGCCCATGCTCCTCAACTCATCACTGCCCCACCTTCCTATCTCActgattctcttgttaatcttacaaCTCATCGCCACGGCATACCTATTGGTCCAATGGCTGCATCCGATTGGTTGTATGTTTATCCCAAAGGAATCCGAGAATTATTGCTCTACACCAAGTCAAAGTACAACAACCCACTCATCTATATTACGGAAAATGGCGTAGATGAGTTTAATGATCCCACGCTATCGCTGCAAGACGCCCTCAACGATACACATAGAATTGATTATTTCTATCACCATCTCCATTACATTAAAACTGCAATTCAgGATGGTGTGAACGTGAAAGGCTACTTCGCATGGTCATTATTAGATAACTTTGAATGGGGTTCGGGGTACACTGTTCGATTTGGGATTAACTTTGTGGATTACAATAATGGGCTAAAACGATATCCCAAACTCTCAAACGATTGGTTTAAGAATTTTCTCCAAAAGGATATTGAAGTTGGACGTGACGTGATATAA 1506 0.4177 MIESVSMDITYEYGSASLNRSSFPHGFIFGTASSSYQYEGAAHVGGKGPSIWDAYTHKHPERIKDRSNGDVAVDEYHRYKEDVRIMKEMNWDAYRFSISWSRILPKGKISGGVNKEGIKYYNNLIDELLANGIEPSVTLFHWDLPESLEEEYGGFLSPKIVKDFGDYAELCFKEFGEKVKHWITLNEPWSYSSDGYATGEIAPGRCSNPKKCLNGDSGTEPYIVSHHFLLSHAFAVNIYRTKFQASQKGLIGISLACKWMVPYSDSQLDSEAAETARDFMYGWYMEPLSSGDYPKSMRCLVGSRLPKFSEKQRKLLIGSFDFIGLNYYTSLYAAHAPQLITAPPSYLTDSLVNLTTHRHGIPIGPMAASDWLYVYPKGIRELLLYTKSKYNNPLIYITENGVDEFNDPTLSLQDALNDTHRIDYFYHHLHYIKTAIQDGVNVKGYFAWSLLDNFEWGSGYTVRFGINFVDYNNGLKRYPKLSNDWFKNFLQKDIEVGRDVI 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0076 501 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 12 496 - -
Sto12g0076 501 Pfam Glycosyl hydrolase family 1 21 492 IPR001360 GO:0004553|GO:0005975
Sto12g0076 501 PANTHER GLYCOSYL HYDROLASE 12 496 IPR001360 GO:0004553|GO:0005975
Sto12g0076 501 Gene3D Glycosidases 4 492 - -
Sto12g0076 501 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 27 41 IPR033132 -
Sto12g0076 501 PRINTS Glycosyl hydrolase family 1 signature 319 333 IPR001360 GO:0004553|GO:0005975
Sto12g0076 501 PRINTS Glycosyl hydrolase family 1 signature 395 403 IPR001360 GO:0004553|GO:0005975
Sto12g0076 501 PRINTS Glycosyl hydrolase family 1 signature 418 429 IPR001360 GO:0004553|GO:0005975
Sto12g0076 501 PRINTS Glycosyl hydrolase family 1 signature 439 456 IPR001360 GO:0004553|GO:0005975
Sto12g0076 501 PRINTS Glycosyl hydrolase family 1 signature 463 475 IPR001360 GO:0004553|GO:0005975
Sto12g0076 501 SUPERFAMILY (Trans)glycosidases 14 491 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0076 Sto-Chr12 510058 513931 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0076 18 486 Glycoside Hydrolase AT5G42260 55.814 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0076 - K01188 gmx:100812431 742.651