Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0053 ATGGCGTCGAACAATTGTATCCCCTGCACCGGCAAGGGCCTCATCGTCAGCTTCGGTGAGATGCTCATTGATTTCGTCCCTACCGTCTCCGGCGTCTCCTTGGCCGAGGCTCCCGGCTTCCTCAAAGCCCCCGGCGGCGCCCCTGCCAACGTCGCCATCGCCGTCTCAAGACTCGGCGGCCAGGCCTCCTTCGTTGGCAAGCTCGGTGACGACGAGTTCGGTCACATGCTCGCCGGGATCTTGAAGGAAAACGGCGTCAGATCCGATGGCATCACCTTCGACCAGGGTGCTCGTACTGCCTTGGCCTTCGTCACCCTACGCGCCGACGGTGAGCGTGAGTTCATGTTCTACAGAAATCCAAGCGCAGATATGCTCCTCAAGCCCGAAGAGCTCAATCTTGAACTCATCAGATCCGCTAAAGTATTCCATTATGGATCAATAAGCTTGATCGTGGAGCCATGCAGATCGGCACACCTGAAGGCAATGGAAGTTGCGAAAGAAGCTGGTTGCTTGCTCTCTTATGATCCAAACCTGAGACTGCCATTGTGGCCATCTCCTGAGGAGGCCCGTAACCAAATCATGAGTATATGGGAAAAGGCAGATATCATTAAGTTGCTCCTCGTCACTCTTGGTGAACACGGTTCTAGATACTACACCAAGAACTTCCATGGATCAGTGGATGCCTTCCATGTTAATACAATCGATACAACTGGCGCTGGTGATTCCTTTGTTGGTGCCCTCTTGTGCAAGATTGTCGATGATCAGTCCATTCTCGAAGATGAACCAAGGTTGAGAGAAGTACTCAAGTTTGCAAATGCTTGTGGAGCAATTACAACTACTAAGAAGGGAGCAATTCCCGCCCTTCCCGCAGAGGCTGATGCTCTCAAACTTATCAAAGGAGCCTAG 906 0.5243 MASNNCIPCTGKGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVSRLGGQASFVGKLGDDEFGHMLAGILKENGVRSDGITFDQGARTALAFVTLRADGEREFMFYRNPSADMLLKPEELNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGCLLSYDPNLRLPLWPSPEEARNQIMSIWEKADIIKLLLVTLGEHGSRYYTKNFHGSVDAFHVNTIDTTGAGDSFVGALLCKIVDDQSILEDEPRLREVLKFANACGAITTTKKGAIPALPAEADALKLIKGA 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0053 301 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
Sto12g0053 301 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Sto12g0053 301 PRINTS Ribokinase signature 206 217 IPR002139 GO:0016301
Sto12g0053 301 CDD bac_FRK 14 285 - -
Sto12g0053 301 Pfam pfkB family carbohydrate kinase 14 204 IPR011611 -
Sto12g0053 301 PANTHER BNAA04G18320D PROTEIN 19 204 - -
Sto12g0053 301 PANTHER BNAA04G18320D PROTEIN 203 297 - -
Sto12g0053 301 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 235 248 IPR002173 GO:0016773
Sto12g0053 301 Gene3D - 205 295 IPR029056 -
Sto12g0053 301 PANTHER HEXOKINASE FAMILY MEMBER 19 204 - -
Sto12g0053 301 PANTHER HEXOKINASE FAMILY MEMBER 203 297 - -
Sto12g0053 301 Gene3D - 12 204 IPR029056 -
Sto12g0053 301 SUPERFAMILY Ribokinase-like 15 297 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0053 Sto-Chr12 354145 356639 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0053 K00847 - gmx:100803713 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0053 12 354145 356639 Sto12g0053 12 354145 356639 ECH