Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0048 ATGGGGAAGCCTTTGTTTTATGAGATCTTAGAAAAACCCGccacaagttgtatcatagggTTATGCAGTGCGATTTGGTTCTACATACAGAAGAAACACATTGGCTATTCTCATGTGGGTCTGAGTTACGAGACTGCCATGGAAGGACATCATTGGAGGATAATCACTTCGGCCTTTTCTCATATTAGTGTTCTTCATCTTGTTTTCAATATGAGTGCGCTTTGGAGTCTTGGGGTGGTAGAGCAGCTGGGGCACATGGGTCTGGGTGTTCAGTACTATTTACAGTACACACTTGTCATGGTTGTATTATCAGGTATTCTAGTTTTGGGCATGTACCACATATTAATCCAGAGATTCAAGCTTGAGCACTTTCGTAGAGTAACAGCTGTTGGGTATTCCTGTGTTGTTTTTGGGTGGATGACAATCCTTTCAGTGAAGCAACCCTCTTCCAAGCTAGAATTATTTGGATTTCTTTCACTTCCCATCAGTTTTGCCCCGTTTGAATCACTTGTTTTTACTTCAATTATTGTTCCCCAAGCAAGTTTCCTGGGCCATTTATCAGGAATTGTTGTTGGATATGCTATTGCATGGGGTTTGATTCATGGTATGAACAATTACTGGGCCCTTACCTTGTTAGGTTGGATTGTGCTTGTCTTTGTTTTGAGTTTGAAGAAATCTGGTGCAACTGATCTCGACTTTCTTGAGATCGAATCTGTTACAGATCCATCATTGCCATCTGTACGGTTTCTGGCATCAGGGAATGGCAGAACATTGCAGATGAGTGCATTGCCAGTTGGAAATGTCGAACTTGTTTAA 816 0.4056 MGKPLFYEILEKPATSCIIGLCSAIWFYIQKKHIGYSHVGLSYETAMEGHHWRIITSAFSHISVLHLVFNMSALWSLGVVEQLGHMGLGVQYYLQYTLVMVVLSGILVLGMYHILIQRFKLEHFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGFLSLPISFAPFESLVFTSIIVPQASFLGHLSGIVVGYAIAWGLIHGMNNYWALTLLGWIVLVFVLSLKKSGATDLDFLEIESVTDPSLPSVRFLASGNGRTLQMSALPVGNVELV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0048 271 Gene3D - 10 201 IPR035952 -
Sto12g0048 271 PANTHER RHOMBOID-LIKE PROTEIN 13 1 271 - -
Sto12g0048 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
Sto12g0048 271 PANTHER RHOMBOID PROTEASE 1 271 - -
Sto12g0048 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0048 Sto-Chr12 341081 341896 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0048 - - gmx:100818954 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0048 12 341081 341896 Sto12g0048 12 341081 341896 ECH