Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0042 ATGCATATGCTCTCTAAGGCTTCCTCTGCTATGGCCACCCTCCCTTGTTCTAGGGTGAGAAGTGGCTTTTGTGTATGGCCGGATGTGAGACAACTTTGCCTTAGAAAAGGTCTTCTATATGGGTTTATGCGACTCTTTTCCATACCGCTAAAGACAATACGTGGAGCCAGTCGATCACTGAGAGTCGGTCAATTTTGCAGTGTAGTGAATATGTCATCCTCATTACAAATTGAATTGGTGAGCAGGTCTCTTCGATtaattaattttcaggTGCCATGTCTCCGGGACAATTATGCATATCTTTTACATGATGTGGATACAGGGACAGTTGGTGTTGTTGATCCTTCTGAAGCTGTGCCCATTATTGATGCCTTGAGCAGGAAAAATCGAAATTTGACATACATACTGAatactcatcatcatcatgatcaCACTGGTGGGAATGCAGAGTTGAAAGCAAGGTATGGAGCAAAGGTGATTGGTGCAGGAGTAGACAAGGAAAGGATTCCTGGTattgatatttatttgaatGATGGAGATAAGTGGATGTTTGCAGGCCATGAGGTGCTTATAATGGAGACACCTGGTCATACTCGAGGTCACATAAGCTTCTATTTTCCTGGATCTGGGGCAATTTTTACTGGAGACACCTTGTTCAGCTTATCCTGTGGCAAGCTCTTTGAAGGAACCCCTGAGCAGGTGGATGTGAATTGTATTTATTTGTTCTATCTTCTTTGGATGCTATCATCTTTAAAGAAGATCACGTCATTGCCAGATGATACATGTATATACTGTGGTCATGAATATACCTTGAGTAATTCGAAGTTTGCATTATCTATAGAACCCTCAAACAAGGAACTTCAGTCCTATGCTGCCCATGTAGGCCACCTTCGAAGTAAAGGCTTGCCTACCATTCCAACTACACTGAAGACGGAAAAGGCCTGCAATCCATTCCTTCGGACAACGAGTGCAGAAATTCGGCAGTCCTTGAACATTGCAGTCACAGCAGATGATGCAGAAGCCTTAGGTGTCATTCGCCAAGCAAAGGACAATTTTTAG 1059 0.4164 MHMLSKASSAMATLPCSRVRSGFCVWPDVRQLCLRKGLLYGFMRLFSIPLKTIRGASRSLRVGQFCSVVNMSSSLQIELVSRSLRLINFQVPCLRDNYAYLLHDVDTGTVGVVDPSEAVPIIDALSRKNRNLTYILNTHHHHDHTGGNAELKARYGAKVIGAGVDKERIPGIDIYLNDGDKWMFAGHEVLIMETPGHTRGHISFYFPGSGAIFTGDTLFSLSCGKLFEGTPEQVDVNCIYLFYLLWMLSSLKKITSLPDDTCIYCGHEYTLSNSKFALSIEPSNKELQSYAAHVGHLRSKGLPTIPTTLKTEKACNPFLRTTSAEIRQSLNIAVTADDAEALGVIRQAKDNF 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0042 352 Gene3D - 89 352 IPR036866 -
Sto12g0042 352 CDD hydroxyacylglutathione_hydrolase_MBL-fold 90 267 IPR035680 -
Sto12g0042 352 SUPERFAMILY Metallo-hydrolase/oxidoreductase 88 351 IPR036866 -
Sto12g0042 352 Pfam Metallo-beta-lactamase superfamily 99 267 IPR001279 -
Sto12g0042 352 PANTHER BETA LACTAMASE DOMAIN 3 352 - -
Sto12g0042 352 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 3 352 - -
Sto12g0042 352 SMART Lactamase_B_5a 96 267 IPR001279 -
Sto12g0042 352 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 90 352 IPR017782 GO:0004416|GO:0019243
Sto12g0042 352 Pfam Hydroxyacylglutathione hydrolase C-terminus 268 352 IPR032282 -
Sto12g0042 352 Hamap Hydroxyacylglutathione hydrolase [gloB]. 86 352 IPR017782 GO:0004416|GO:0019243
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0042 Sto-Chr12 309555 315013 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0042 K01069 - gmx:100816314 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0042 12 309555 315013 Sto12g0042 12 309555 315013 ECH