Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0030 ATGGCTGTGAACGATGCCGATCAATCACACAAGGCTCACAGGTCTCGTCAGGCGGGTGCATCTTTCAAAAAAGGCAAATCGgacaagaagaaaaagaagcaagACGTTGGCGAGGATCAGAAAAAGCAAAACCCTAAgCTTAATATATGTCAGGCATTTGCTTTTGCTTCCTCTGCCAAAGCTAAGAGATTACAATCCCGTGCAGTCGAGAAAGAGCAGCGTCGTCTTCACGTTCCAATTATTGACAGGTCTTATGGTGAGCCAGCCCCTTATGTCGTTGTGGTTCAGGGTCCTCCCAAGGTTGGGAAGTCACTCTTAATAAAGTCCCTAGTAAAGCATTATACGAAGCACAATTTGCCTGACGTACGAGGTCCAATTACAATCGTATCAGGAAAGCAAAGACGACTGCAATTTGTGGAATGCCCGAATGATATCAATGGCATGATAGATGCGGCAAAGTTTGCAGACCTAGCATTGCTTCTCATAGATGGGAGTTATGGTTTTGAAGTGGAAACCTTTGAATTCCTTAATATATTGCAAGTTCATGGATTTCCAAAGGTCATGGGAGTTTTAACTCATCTTGATAAATTCAAGGATGctaaaaagttgaagaaaacaAAGCAACGTCTTAAACACCGATTCTGGACTGAAATATATGATGGAgctaaattgttttatttatcAGGTCTTATTCATGGAAAGTATACTAAACGTGAAGTACACAATCTTGCTCGTTTCATTTCTGTTATGAAGTTTCATCCTCTATCTTGGAGAACTTCTCACCCTTATGTTTTGGTGGATCGGTTTGAAGATATCACTCCTCCCGAGAAAGtgcaagaaaataataaatgtgACAGAAAAGTCACACTTTATGGTTATTTGAGAGGATGTAATTTGAAAATGGGAAATAAGGTGCACATAGCGGGAGTGGGTGATCATAGTTTAGCTGGTATCACTGTTTTACCAGATCCTTGTCCTCTACCATCTGCTGCAAAAAAGAAAGGACTGCGTGATAGGGAGAAGTTATTCTATGCGCCCATGTCTGGTCTTGGGGATCTGTTATATGACAAAGATGCTGTATACATAAATATCAATGACCACTTGGTACAGTTTTCCAAAACTGACGATGAAAACTTAGCCATGGCAGGAAAAGGAAAGGACAGAGATGTGGGTGAAGTTTTGGTGAGATCACTTCAGAATACCAAATACTCAATTAATGAAAAACTAGAGAACAGCTCTATCAGTCTTTTTAGCCAAAAGTCAAATGTGTCATCAGAAGCTCTCAATGATGCACAAGGTAGAAATGCAGATTCAGATAAATATCAGCCTAGTGAAGTAATTGAAGCTGGTACAGTTGGTGAAGAAAATAATGAAATGGATATGGATGGTTCAGAATCATCTGATCAAGGCAGTGAAACTAGTGGTTCTGATGAAGATGGTCATGTGACAGATAGTAAAGCTACTCCTGGAGATCGCTTCAAAGAACATGTTGAGTTTCATGGTGGAAGACTAAGGAGAAGAGCAGTGTTTGGAAATGATGTTGATCAAAATGATTTGAAGGATTCAGATGAAGAGGATGGAGCTgtgagtgatgatgtggcatcttCTGATTCAGAATATTCTGATGAAGGGGATGATGATATAGATGAAGATGACATGGGAAACGTTTCAAAGTGGAAAGAGTCTTTGGTTGAAAGAACTATGTCACGGCAAACTCTTAGCCTGATGCAACTTGTGTATGGGAAGTCTACAGTTAATTCAACCGATGTAAAAAAAGAGAACGATAGTAGTGAGGGTGAAGAAAGTGAAGATGAATTTTTTAAGCCAAAGGAAGAAGTTGAAAAGCAAAAAAGGAGAGAGGGATTGGATTGTGGAATTGTCAACTCGGAGGACTGTTCCAAGACTGCAAAATTTGCAGATCTCAAATGCTGGAAGGACAAAGATTTTGAGCACATTCGTGACCGTTTTGTCACTGGTGATTGGTCAAAAGCTGCACTCAGAAACCAAGTATCTGATGCTAATACTGAAGATGATTATGATGCAGTCTATGGTGACTTTGAAGATTTAGAAGCAGGAGAGAAGCATGAGAGTAATCAGATAGATAGAGAAGTTGCTGAGATAGTACAGAAGGGAGATGACTTGGAAGCTGAAGAGCGGAGGCTCAAGAAACTTGCCCTTCGGGCAAAATTTGATGCTcaatatccttttttttttctCTTTGGATTACCAGAGGAAGAAGCTAGTGACAAAAATAAAGCCAAGTTCCATCGTGGTCAAGCTAATGAAAGTAGCTATTTTGATAAGTTGAAGGAGGAAATTGAACTTCGGAAACAAATGAATATAGCTGAACTCAATGATCTTGATGAGGCTACCCGATTAGAGATAGAAGGCTTCCGAACAGGGAGTTACCTGAGATTGGAGGTTCATGATGTTCCTTGTGAGATGGTTGAATACTTTGATCCCTGCCACCCAATTTTAGTGGGAGGGATTGGTCTTGCAGAGGAAAATATCGGATACATGCAGgCCAGGCTTAAGAGGCATAGATGGCACAAGAAGGTTCTGAAGACTAGAGACCCCATAATTGTTTCTGTTGGATGGAGGCGCTACCAGACAACCCCAGTTTATGCTATTGAGGATCGCAACGGGAGGCATCGTATGCTTAAATACACTCCAGAACATATGCATTGCCTTGCTATGTTTTGGGGCCCACTTGCTCCTCCCAATACTGGGATTGTTGCTGTTCAGAATTTGTCAAACAATCAGGTGAATTCCTTACTCTTGTTTCCTGAATCATTTAGGATTACTGCAACTGCTGTCGTACTTGAGTTTAATCATGCAGCAAGGATagtgaagaaaatcaagttggtTGGTTACCCATGCAAAATATTCAAGAAGACAGCACTTATTAAGGATATGTTCACTTCAGATCTTGAAGTAGCTCGGTTTGAAGGTGCAGCTATTCGAACAGTCAGTGGGATCAGAGGGCAGGTCAAGAAGGCTGCAAAAGAAGAAATAGGTAACCAGCCAAAGAAGAAGGGAGGCCAACCCAAAGAAGGAATAGCTCGGTGCACTTTTGAGGACAAAATTCTGATGAGTGACATTGTTTTCTTGCGTGCATGGACTCAAGTCGAAGTTCCTCAGTTCTATAATCCCTTGACAACAGCATTGCAACCTCGTGAGTTGACCTGGCAAGGAATGAAAACTGTTGCTGAATTGAGAAGAGAGCACAATCTTCCTGTCCCTTTAAACAAAGATTCACTTTACAAGAAAATTGAAAGAAAGCAAAGGAAGTTCAATCCGTTGGTGGTTCCCAAGTCTCTACAGGAATCTCTTCCTTTTGCTTCAAAACCTAAAGAAACACCCAGTCGGAAACGTCGATCACTGGCTGAGAGAAGGGCTGTTGTCTGGGATTCTCATGAACGTAAAGTTCATGCTCTTGTACAACAGCTCCAGTTAATCAGAAATGAGAAGTTGAAAAAGCGAAAGCTTAAGgaagagaagaggaggaaggaACATGAAGAAGAGAAATTAAAAGATGAACAGTTGTCAAGAAAGCGGCAAAGAGAGGAAAGACGACAGAGGTATCGTGAGCaagaaaaagtgaagaaaattcGGAGAGCAGAGGCCTga 3630 0.3934 MAVNDADQSHKAHRSRQAGASFKKGKSDKKKKKQDVGEDQKKQNPKLNICQAFAFASSAKAKRLQSRAVEKEQRRLHVPIIDRSYGEPAPYVVVVQGPPKVGKSLLIKSLVKHYTKHNLPDVRGPITIVSGKQRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEVETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYTKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFEDITPPEKVQENNKCDRKVTLYGYLRGCNLKMGNKVHIAGVGDHSLAGITVLPDPCPLPSAAKKKGLRDREKLFYAPMSGLGDLLYDKDAVYININDHLVQFSKTDDENLAMAGKGKDRDVGEVLVRSLQNTKYSINEKLENSSISLFSQKSNVSSEALNDAQGRNADSDKYQPSEVIEAGTVGEENNEMDMDGSESSDQGSETSGSDEDGHVTDSKATPGDRFKEHVEFHGGRLRRRAVFGNDVDQNDLKDSDEEDGAVSDDVASSDSEYSDEGDDDIDEDDMGNVSKWKESLVERTMSRQTLSLMQLVYGKSTVNSTDVKKENDSSEGEESEDEFFKPKEEVEKQKRREGLDCGIVNSEDCSKTAKFADLKCWKDKDFEHIRDRFVTGDWSKAALRNQVSDANTEDDYDAVYGDFEDLEAGEKHESNQIDREVAEIVQKGDDLEAEERRLKKLALRAKFDAQYPFFFLFGLPEEEASDKNKAKFHRGQANESSYFDKLKEEIELRKQMNIAELNDLDEATRLEIEGFRTGSYLRLEVHDVPCEMVEYFDPCHPILVGGIGLAEENIGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDRNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQNLSNNQVNSLLLFPESFRITATAVVLEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQPKKKGGQPKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRELTWQGMKTVAELRREHNLPVPLNKDSLYKKIERKQRKFNPLVVPKSLQESLPFASKPKETPSRKRRSLAERRAVVWDSHERKVHALVQQLQLIRNEKLKKRKLKEEKRRKEHEEEKLKDEQLSRKRQREERRQRYREQEKVKKIRRAEA 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0030 1209 MobiDBLite consensus disorder prediction 474 517 - -
Sto12g0030 1209 Pfam AARP2CN (NUC121) domain 239 324 IPR012948 GO:0005634|GO:0042254
Sto12g0030 1209 MobiDBLite consensus disorder prediction 427 557 - -
Sto12g0030 1209 CDD BMS1 63 281 IPR037875 GO:0005525
Sto12g0030 1209 MobiDBLite consensus disorder prediction 588 619 - -
Sto12g0030 1209 MobiDBLite consensus disorder prediction 1 43 - -
Sto12g0030 1209 MobiDBLite consensus disorder prediction 1167 1209 - -
Sto12g0030 1209 Coils Coil 1146 1198 - -
Sto12g0030 1209 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 89 253 IPR030387 -
Sto12g0030 1209 MobiDBLite consensus disorder prediction 16 30 - -
Sto12g0030 1209 MobiDBLite consensus disorder prediction 1158 1209 - -
Sto12g0030 1209 MobiDBLite consensus disorder prediction 518 552 - -
Sto12g0030 1209 SMART DUF663_2 703 1043 IPR007034 -
Sto12g0030 1209 Gene3D - 91 253 IPR027417 -
Sto12g0030 1209 MobiDBLite consensus disorder prediction 584 619 - -
Sto12g0030 1209 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 713 1044 IPR007034 -
Sto12g0030 1209 PANTHER RIBOSOME BIOGENESIS PROTEIN 471 1200 IPR039761 GO:0042254
Sto12g0030 1209 PANTHER RIBOSOME BIOGENESIS PROTEIN 1 425 IPR039761 GO:0042254
Sto12g0030 1209 PANTHER BNAC08G44910D PROTEIN 1 425 - -
Sto12g0030 1209 PANTHER BNAC08G44910D PROTEIN 471 1200 - -
Sto12g0030 1209 SMART aarp2cn2 239 325 IPR012948 GO:0005634|GO:0042254
Sto12g0030 1209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 226 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0030 K14569 - gmx:100792176 1720.29