Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0029 ATGAATAACGATGACCACAACAGGCGGGAAGAAGATCAGAGGAATAAGGACAGTAGCGTCGCAAGCCAGGACTCCAGGTTAAATCAGACCCTCAAGAATGTTCAAGGCTTACTGAAAGGTCGTAGCATCCCTGGTAAAATATTATTGTCTCGGAGATCAGACACGCTAGATAACTCAAAGGAATATTCGCCAAAATACGAAAGGAGCTTCTCATTCAATGATGCTGGTACAAGCGATCACCCAGCTAAGGCAGTAGAGGAAGAAGTCCAGAGTACAAGCAAACCAATCAGTGTTGCCAatgtgaataaattaaaaaaatctaactcTAACTTTGATAACCCATCTGAAGAAGTCCAGAAATCTTTCATGGGTGCTAGAGCTACTGATTCTGCAAGAGTTATGAAGTTCACTAAGGTGCTTTCTGGGACGACGGTGATATTagacAAGTTGCGTGAACTAGCTTGGAGTGGTGTTCCAGATTATATGCGCCCTACAGTATGGAGGCTTCTCTTGGGATATGCACCACCTAATTCAGATAGAAGGGAGGCAGTTTTGAGAAGGAAGCGCCTTGAGTATCTAGACTGTGTTTCTCAGTATTATGACATTCCTGATACACAACGTTCAGATGATGAAATCAACATGCTTCGCCAGATTGCTGTTGATTGTCCAAGAACTGTGCCTGATGTTTCATTCTTCCAGCAACAACAAGTTCAGAAATCATTGGAGCGCATTCTTTATACATGGGCCATTCGGCATCCTGCAAGTGGATACGTTCAGGGAATTAATGATCTTGTTACCCCGTTTTTAGTTGTTTTCCTATCAGAATACTTAGAAGGGGGTATAGATAATTGGTCAATGTCTGATTTATCTTCAGATAAAATTTCTAATATAGAGGCTGACTGCTATTGGTGCTTGTCAAAGTTGCTTGATGGTATGCAAGATCATTACACATTTGCTCAACCAGGAATTCAGAGACTCGTTTTCAAGTTGAAGGAATTAGTCAGGAGGATTGatgAGCCTGTTTCAAGACATGTGGAGGATCAAGGACTGGAATTTCTTCAGTTTGCTTTCCGCTGGTTCAACTGTCTTCTAATCCGTGAGataccTTTCCATCTTATCACACGCCTTTGGGACACATATCTGGCTGAAGGAGATGCCTTACCGGATTTCCTTGTGTATATATTTGCCAGTTTTCTTCTAACGTGGTCGGATAAGCTCCAGAAGCTTGACTTCCAAGAGCTGGTAATGTTCCTTCAACATCTTCCAACTCAGAACTGGAGTCACCAAGAGCTTGAGATGGTGCTTTCTCGCGCCTTTATGTGGCACAGCATGTTCAACAACTCTCCCAGCCATTTATCTAGCTGA 1365 0.4176 MNNDDHNRREEDQRNKDSSVASQDSRLNQTLKNVQGLLKGRSIPGKILLSRRSDTLDNSKEYSPKYERSFSFNDAGTSDHPAKAVEEEVQSTSKPISVANVNKLKKSNSNFDNPSEEVQKSFMGARATDSARVMKFTKVLSGTTVILDKLRELAWSGVPDYMRPTVWRLLLGYAPPNSDRREAVLRRKRLEYLDCVSQYYDIPDTQRSDDEINMLRQIAVDCPRTVPDVSFFQQQQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEYLEGGIDNWSMSDLSSDKISNIEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSRHVEDQGLEFLQFAFRWFNCLLIREIPFHLITRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQKLDFQELVMFLQHLPTQNWSHQELEMVLSRAFMWHSMFNNSPSHLSS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0029 454 MobiDBLite consensus disorder prediction 1 19 - -
Sto12g0029 454 Gene3D - 134 185 - -
Sto12g0029 454 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 136 344 IPR035969 -
Sto12g0029 454 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 451 - -
Sto12g0029 454 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 320 442 IPR035969 -
Sto12g0029 454 Gene3D - 319 454 - -
Sto12g0029 454 ProSiteProfiles TBC/rab GAP domain profile. 157 384 IPR000195 -
Sto12g0029 454 PANTHER GTPASE-ACTIVATING PROTEIN GYP1-LIKE 2 451 - -
Sto12g0029 454 SMART tbc_4 154 410 IPR000195 -
Sto12g0029 454 Pfam Rab-GTPase-TBC domain 161 405 IPR000195 -
Sto12g0029 454 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 193 318 - -
Sto12g0029 454 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0029 Sto-Chr12 215007 221011 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0029 K20360 - zju:107435076 787.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0029 12 215007 221011 Sto12g0029 12 215007 221011 ECH