Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0022 ATGAAAGCCGATCTCTCAAATTCGAAGGCTTCCAGCAAATGGAGCTTTCAAGAGAGACAGATTCTTGAGtTATTCTCCATTAGAAGAAGCTGGGGCACTCCAAATCCAAATGGCAGAGGCGTCTATTTTGGCAGCAGCTTCCAACTCTCTCATCCTCTCACAACATTTAATTCCCCAATTATAGCTCTTGCCTCAGGCTTAGAAGCATCAGTTACGGATTCAAACCAAAATTCACCAATCTTAAAAAATGCCAAAATCCTTGTACAATCTCAAGATGCAAATAAATTACAACTAAGAGTGGACTTGACTGGGGATCAAACAGAAAGGGTATTTAACCAGGTCCTTACAAATTTAGCTCGTACTGCACCACCAATTCCTGGATTTCGTAGACAAAAAGGAGGGAAAACATCCAAGGTCCCAACCAGCTTCCTTCTGCAGACGCTTGGCGAAGAACGCGTTACCAAGTTTGTAATACAAGAAATACTTAATTCAACTATGGCTGATTATGTGAGAAAGGAAAACCTAGATGTGAAGGACTGGAATATAAGCACCATTCAGACGGCAGAAGAACTTAAAAAGTCATTCAGGCCAGGAAATGAATTTGGCTTCTGTGTTATAATTGAGCCTCCTCAGAATTCATAA 642 0.4081 MKADLSNSKASSKWSFQERQILELFSIRRSWGTPNPNGRGVYFGSSFQLSHPLTTFNSPIIALASGLEASVTDSNQNSPILKNAKILVQSQDANKLQLRVDLTGDQTERVFNQVLTNLARTAPPIPGFRRQKGGKTSKVPTSFLLQTLGEERVTKFVIQEILNSTMADYVRKENLDVKDWNISTIQTAEELKKSFRPGNEFGFCVIIEPPQNS 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0022 213 PANTHER OS01G0894700 PROTEIN 48 208 - -
Sto12g0022 213 Gene3D - 86 209 IPR036611 GO:0006457|GO:0015031
Sto12g0022 213 Pfam Bacterial trigger factor protein (TF) 87 186 IPR008881 GO:0006457|GO:0015031
Sto12g0022 213 SUPERFAMILY Trigger factor ribosome-binding domain 86 187 IPR036611 GO:0006457|GO:0015031
Sto12g0022 213 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 48 208 IPR005215 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0022 Sto-Chr12 185491 188124 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0022 - - var:108339891 223.787