Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2284 ATGTCGCAGAAAAGATACATCATCGAGGTAGAGAAAGCAAAGGAGGCGAAGGATGGGAAGCCATCGATGGGTCCTGTGTACCGCAGCCTCTTTGCCAAGGATGGATTTCCGCCTCCTACTGAGGGGCTTGATAGTTGCTGGGATGTTTTCCGCATGTCGGTTGAGAAATATCCTGGCAATCCAATGCTTGGTCAACGAGAAATAGTGGATGGGAAGGCTGGCAAGTACATATGGCAAAGTTACAAAGAAGTATATGACGTGGTGATGAAAGTTGGTAATTCCATCCGCAGTTGTGGTTATGGGGAAGGTGTAAAATGTGGTATTTATGGTGCCAATTGTCCAGAATGGATTATGAGCATGGAGGCTTGCAATGCCCATGGCCTTTATTGTGTTCCTTTATATGATACTTTAGGTGCTGGCGCTATAGAATTCATTATTTGCCATTCAGAGGTCTCGATTGCTTTTGTAGAAGAGAAGAAGATTCCTGAGCTATTCAAGACATTTCCAAACACAACAAAGTATCTCAAGACACTTGTGAGCTTTGGAAAGGTTACACCTGAACAAAAACAAGAAGTTGAAAAACATGGGTTGGCAATATATTCTTGGGATGATTTCTTACAACTGGGTCATGGTCAAAGCTTTGATCTTCCtgttaaaaagaaaagtgatatcTGCACAATAATGTATACCAGTGGAACTACTGGTGATCCCAAGGGGGTGATGATATCCAATGAGAGTATTATTACACTCTTAGCTGGGGTTAAGCTATTGTTAGAGAGTGTGAATGAACGATTGCATGACAAGGACGTATACCTTTCATATCTTCCACTAGCACATATATTTGATAGAGTCATCGAGGAGCTATTTATATGGCATGGTGCCTCAATAGGATTCTGGCGTGGGGATGTTAAACTATTAATTGAAGACATTGGGGAACTCAAACCATCGATTTTTTGTGCTGTTCCTCGGGTGCTTGATAGAATACACTCAGGTTTGACGCAGAAGATTTCTACAGGGGGCTTCGTAACAAAGACTATGTTCAATTTTGCTTACTCATACAAGTTTCATAACATGAAGAAAGGGGAAAATCATGAAGAGGCATCTCCACTTTTTGACAAAATTGTGTTTAATAAGGTAAAGCAAGGTTTAGGGGGCAATGTACGCCTAATTCTATCTGGAGCAGCACCTCTATCTGCACATGTGGAAAGTTTCCTACGGGTGGTGGCTTGTGCTCATGTTCTACAAGGATATGGTCTGACTGAAACCTGTGCGGGGACTTTTGTCTCATTACCAAATGAACTGGCAATGCTTGGTACAGTTGGCCCTCCTGTGCCAAATGTGGATGTGTGCCTAGAATCTGTTCCTGAGATGGGATATGATGCTCTCTCGAGCCAACCAAGAGGAGAAATTTGTGTAAGGGGAACTACCTTATTTTCAGGGTACTACAAACGTGAAGACCTCACAAAGGAGGTTATGGTTGACGGGTGGTTCCATACAGGGGATATTGGAGAGTGGCAACCCGATGGAAGCATGAAAATAATTGACCGGAAGAAGAATATATTCAAGCTTTCACAAGGAGAATATGTTGCTGTTGAGAACCTGGAGAATATTTATAGTCAAGCTTCTGCTGTTGACTCTATATGGGTTTATGGAAACAGCTTTGAGTCCTTCCTTGTTGCTGTTGTTAACCCCAACAAGCAGGCACTTGAACGTTGGGCAGAAGAAAATGGGGTAAACAAGGACTTCAATTCTCTCTGTGAAGATTCTAGGGCAAAAAGTTTCATAGTGGAAGAGCTCACAAAGATTGGGAAGGAAAAGAAGTTGAAAGGATTTGAGTTTATAAAGTCAGTTCATCTTGAGCCGGAGCCATTTGACATGGAACGTGACCTTATCACTCCAACTTATAAGAAGAAAAGGCCCCAGTTGCTCAAATACTACCAGAATGTCATTGACAACATGTACAAGAGTGGAGGCAAATAG 1980 0.4192 MSQKRYIIEVEKAKEAKDGKPSMGPVYRSLFAKDGFPPPTEGLDSCWDVFRMSVEKYPGNPMLGQREIVDGKAGKYIWQSYKEVYDVVMKVGNSIRSCGYGEGVKCGIYGANCPEWIMSMEACNAHGLYCVPLYDTLGAGAIEFIICHSEVSIAFVEEKKIPELFKTFPNTTKYLKTLVSFGKVTPEQKQEVEKHGLAIYSWDDFLQLGHGQSFDLPVKKKSDICTIMYTSGTTGDPKGVMISNESIITLLAGVKLLLESVNERLHDKDVYLSYLPLAHIFDRVIEELFIWHGASIGFWRGDVKLLIEDIGELKPSIFCAVPRVLDRIHSGLTQKISTGGFVTKTMFNFAYSYKFHNMKKGENHEEASPLFDKIVFNKVKQGLGGNVRLILSGAAPLSAHVESFLRVVACAHVLQGYGLTETCAGTFVSLPNELAMLGTVGPPVPNVDVCLESVPEMGYDALSSQPRGEICVRGTTLFSGYYKREDLTKEVMVDGWFHTGDIGEWQPDGSMKIIDRKKNIFKLSQGEYVAVENLENIYSQASAVDSIWVYGNSFESFLVAVVNPNKQALERWAEENGVNKDFNSLCEDSRAKSFIVEELTKIGKEKKLKGFEFIKSVHLEPEPFDMERDLITPTYKKKRPQLLKYYQNVIDNMYKSGGK 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2284 659 ProSitePatterns Putative AMP-binding domain signature. 227 238 IPR020845 -
Sto11g2284 659 Pfam AMP-binding enzyme 53 524 IPR000873 -
Sto11g2284 659 Gene3D - 42 516 IPR042099 -
Sto11g2284 659 SUPERFAMILY Acetyl-CoA synthetase-like 41 655 - -
Sto11g2284 659 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 656 - -
Sto11g2284 659 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 4-LIKE 5 656 - -
Sto11g2284 659 CDD LC-FACS_euk 74 655 IPR045311 GO:0004467|GO:0006631
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2284 Sto-Chr11 21904219 21913432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2284 3 656 Acyl Lipid Metabolism Gene Families AT4G23850 77.217 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2284 K01897 - gmx:100814965 1182.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2284 11 21904219 21913432 Sto11g2284 11 21904219 21913432 ECH