Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2186 CTGGAGGTGGTTGAGGCTGCACAACATCAGAGTATAGAGGGCGAGTATTCGCTAAAACCTGAAAGCTGCAAATTGCTAAAACCACAAGAAATTCTGATACCTTCTGAAGATGACTACTCCCGGAGCCCACCTCGGGAATATGACGATATTCGACAGGGCTTTTTTCTGGATGATGGTGGCTTCATTGTTGAAGAATTAACTGTGAAAAGTTACAATGGCTCAAGCTTAGATATTGGTACATCAAACAATCGAGAGAGACTTTATAATAAGCAGAATCAATGGCGGCATCTTTATCAGCTTAGTGATTCAGGAGTGGGAAATTCACCTAGTCATGCAGCATTCAGAAATAATGTTCAGGCTGCATCTAATGCCTGGGTAGATATTGGGTCGACATCTTTCCCAGAATTATTAGCTAAAAAATCAGTCAGTGATGATCATAGCAATGTCATGGAACACCTGACAACTGCTGAAAATAAACAAGGTGCTGGTGATGTTCATGGAGGAATACGAACAAAAATGATATCCAAGTCAGGATTTTCTGAGTATTTTATTAAGCATACATTGAAGGGTAAGGGTATTATATGTAGAGGTCCATCTTCTGATGGTAGAGACCAGAATCAGATGAAGGTTGGGATTGGTACTGCTCGGATGGACTCTAATGTATCATTGAGCTCTGGTCCCAAAACTGAGAAGTCTTCTTCTTATAGTCCTGCTATTTCAAGATCTGATGGGGCTAACTACGATGGTATGACTTTAAGAGAATGGTTGAAACTAGAGCACCAAAATTTAAGCAAAGCTGAACGGTTGTATATATTCAGAAAAATTGTTGACCTGGTTGATAGCTTTCACTCCCAGGAAGTTGCATTGCATAACCTGTGCCCATCTTATATCAAATTGCTCCCATCGAACCAGGTCATGTACCTTGGGTTACCTATTTCCACGCAGATAATAGGTAGTGTTGTGAATTCTGAAGCTCTTCCTTTAGAGGAGTCTTTAGTTAGAAAAAGGGCGACGGAGCAGGGATTTTTTCCGTCTCTTGATACATGttcaaagaaacaaaaatttaatgAGAATGTGACGATTGCTAGGGGTTGGAGTCAGTTTCCTCGAAGATCTGACTCATATTTTCAGCCTGCTAGTGATAGTAAAATCAATGCAGTTGGGTCACGAGATTATTGCAATAAATATGAGGAAGATATTCAACTTTCTAAACATGGTGCTCAGAAAATGTCTAGCATCCCTTGTGTATCTGATGTGAGCCAATTGCAGTTGACTTCTGTAAGTGAAAGATTGGAAGACACATGGTATACAGGCCCTGAGGGAGGTTGCACTAGATCATCAAATATCTACTGTTTGGGTGTCCTTCTTTTTGAGTTACTTGGCCATTTTGATTCTGAAGGAGCGCGTATTGCAGCAATGTCAGATCTTCAAAATAGGATTCTTCCTCCATGTTTCCTATCTGAAAATCCCAAGGAAGCTGGATTTTGTCTTTGGTTGCTACATCCCAAGCCATCATCACGCCCAACAACAAGGGAAATCCTGCAATCTGAAGTGATAAATGGATTGCAGGAGGTGTATAGTGAGGATATGTCATCAAGTATTGACCAGGAGGATGCAGAATCAGAGATATTGTTGCATTTCCTCATCTCATTAAAAGATCAGAAGCAGAACGATGCCTCCAAATTAGTAGAAGATATTAGGTGCTTGGAATCAGATATTGAAGATGTGGAGAGAAGGCACAGCTCAAGAAAATCCTTGGTTTCGTCTGGCTGGCAGAATGAATCAAGTTGTCCAAAAGAGAAAATGCTGCCCTCAACACCACCAATCTCTAATGGGAATGAATTTAGATTGATGAAAAACATATCCCAGCTTGAAAGTGCTTACTTTTCCATGAGATCCAAAATTCAGATTCCTGAAACAGGTTATGCAACTCACCCAGATAAAGATTTACTAAGAAATCGTGAGAACTGCTTTGTGGCTcgaaaagatgaagaaaagcATAGAAACATAGATCCTATGGGAATCTTCTTTGATGGATTGTGCAAATATGCCCGTTATAGCAAGTTTGAAGTCAGGGGTGTGCTAAGAAATGCAGATTTTAACAATCCTGCTAATGTAATCTGCTCTCTGAGCTTTGACCGGGATGAGGATTATTTTGCTGCTGCTGGGGtgtcaaagaaaataaagattttCGAGTTCAATGCACTGTTCAGTGACTCtgttgatattcattatccAGTAGCTGAGATGTCAAACAAATCAAAGCTGAGCTGTGTTTGCTGGAATAACTATATTAAGAACTATTTAGCCTCCACAGACTATGATGGTGCAGTTAAGTTATGGGATGCTAGTACAGGTCAAGCGTTCTCTGAGTTCACTGAACATGGAAAGAGGGCTTGGTCTGTTGATTTTTCACCAGTATGCCCTACAAAATTTGCCAGTGGAAGTGATGATTGTTCTGTGAAGTTATGGAACATCAGTGAGAGGAACTGTTTAGGCACCATCAGGAATGTTGCTAACGTCTGCTGTGTTCAATTCTCTTCTCATTCTTCTCATTTGCTGGCCTTTGGATCTGCGGATTACATAACCTATTGCTATGATCTTCGTAATCTTAGAAGTCCCTGGTGTGTGTTAGTTGGCCATGATAAAGCCGTGAGCTATGTCAAATTCCTAGACTCTGAAACACTAGTTTCTGCATCTACTGATAATACGTTAAAGATTTGGGATCTCAATAAAACCTCTTCTGTGGATTCATCCCCTAGTGCTTGCAGCTTAACCCTTTCGGGACATACTAACGAGAAGAATTTTGTGGGTTTATCTGTTGCTGATGGATATATAGCATGTGGTTCAGAAACAAATGAGGTTTATGCCTACTACAGATCTCTTCCCATGCCAATCACTTCGCACAAGTTTGGATCTATGGATCCTATATCTGGGAGAGAGACAGATGACGACAATGGACAATTTGTCTCGAGCGTGTGCTGGAGGGGAAAGTCAGACATGGTTATTGCTGCCAATTCAAGTGGGTGTATAAAAGTGTTACAGATGGTTTAA 3054 0.3991 LEVVEAAQHQSIEGEYSLKPESCKLLKPQEILIPSEDDYSRSPPREYDDIRQGFFLDDGGFIVEELTVKSYNGSSLDIGTSNNRERLYNKQNQWRHLYQLSDSGVGNSPSHAAFRNNVQAASNAWVDIGSTSFPELLAKKSVSDDHSNVMEHLTTAENKQGAGDVHGGIRTKMISKSGFSEYFIKHTLKGKGIICRGPSSDGRDQNQMKVGIGTARMDSNVSLSSGPKTEKSSSYSPAISRSDGANYDGMTLREWLKLEHQNLSKAERLYIFRKIVDLVDSFHSQEVALHNLCPSYIKLLPSNQVMYLGLPISTQIIGSVVNSEALPLEESLVRKRATEQGFFPSLDTCSKKQKFNENVTIARGWSQFPRRSDSYFQPASDSKINAVGSRDYCNKYEEDIQLSKHGAQKMSSIPCVSDVSQLQLTSVSERLEDTWYTGPEGGCTRSSNIYCLGVLLFELLGHFDSEGARIAAMSDLQNRILPPCFLSENPKEAGFCLWLLHPKPSSRPTTREILQSEVINGLQEVYSEDMSSSIDQEDAESEILLHFLISLKDQKQNDASKLVEDIRCLESDIEDVERRHSSRKSLVSSGWQNESSCPKEKMLPSTPPISNGNEFRLMKNISQLESAYFSMRSKIQIPETGYATHPDKDLLRNRENCFVARKDEEKHRNIDPMGIFFDGLCKYARYSKFEVRGVLRNADFNNPANVICSLSFDRDEDYFAAAGVSKKIKIFEFNALFSDSVDIHYPVAEMSNKSKLSCVCWNNYIKNYLASTDYDGAVKLWDASTGQAFSEFTEHGKRAWSVDFSPVCPTKFASGSDDCSVKLWNISERNCLGTIRNVANVCCVQFSSHSSHLLAFGSADYITYCYDLRNLRSPWCVLVGHDKAVSYVKFLDSETLVSASTDNTLKIWDLNKTSSVDSSPSACSLTLSGHTNEKNFVGLSVADGYIACGSETNEVYAYYRSLPMPITSHKFGSMDPISGRETDDDNGQFVSSVCWRGKSDMVIAANSSGCIKVLQMV 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2186 1017 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 792 827 - -
Sto11g2186 1017 SMART WD40_4 688 732 IPR001680 GO:0005515
Sto11g2186 1017 SMART WD40_4 743 782 IPR001680 GO:0005515
Sto11g2186 1017 SMART WD40_4 871 909 IPR001680 GO:0005515
Sto11g2186 1017 SMART WD40_4 785 825 IPR001680 GO:0005515
Sto11g2186 1017 SMART WD40_4 976 1015 IPR001680 GO:0005515
Sto11g2186 1017 SMART WD40_4 828 867 IPR001680 GO:0005515
Sto11g2186 1017 SMART WD40_4 920 959 IPR001680 GO:0005515
Sto11g2186 1017 SUPERFAMILY Protein kinase-like (PK-like) 249 526 IPR011009 -
Sto11g2186 1017 SUPERFAMILY WD40 repeat-like 700 1015 IPR036322 GO:0005515
Sto11g2186 1017 Coils Coil 552 579 - -
Sto11g2186 1017 ProSiteProfiles Trp-Asp (WD) repeats profile. 878 918 IPR001680 GO:0005515
Sto11g2186 1017 ProSitePatterns Trp-Asp (WD) repeats signature. 896 910 IPR019775 -
Sto11g2186 1017 PRINTS G protein beta WD-40 repeat signature 896 910 IPR020472 -
Sto11g2186 1017 PRINTS G protein beta WD-40 repeat signature 769 783 IPR020472 -
Sto11g2186 1017 PRINTS G protein beta WD-40 repeat signature 812 826 IPR020472 -
Sto11g2186 1017 ProSiteProfiles Trp-Asp (WD) repeats profile. 749 791 IPR001680 GO:0005515
Sto11g2186 1017 ProSiteProfiles Trp-Asp (WD) repeats profile. 792 834 IPR001680 GO:0005515
Sto11g2186 1017 PANTHER PROTEIN SPA1-RELATED 2 3 1017 IPR044630 GO:0009640
Sto11g2186 1017 ProSitePatterns Trp-Asp (WD) repeats signature. 769 783 IPR019775 -
Sto11g2186 1017 MobiDBLite consensus disorder prediction 587 609 - -
Sto11g2186 1017 Pfam WD domain, G-beta repeat 877 909 IPR001680 GO:0005515
Sto11g2186 1017 Pfam WD domain, G-beta repeat 788 825 IPR001680 GO:0005515
Sto11g2186 1017 Gene3D - 677 1017 IPR015943 GO:0005515
Sto11g2186 1017 PANTHER PROTEIN SPA1-RELATED 2 3 1017 - -
Sto11g2186 1017 MobiDBLite consensus disorder prediction 218 240 - -
Sto11g2186 1017 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 878 911 - -
Sto11g2186 1017 Gene3D Transferase(Phosphotransferase) domain 1 248 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2186 Sto-Chr11 20774523 20782616 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2186 789 958 Miscellaneous Gene Families AT5G08390 26.163 6.74e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2186 K16240 - gmx:100776980 1383.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2186 11 20774523 20782616 Sto11g2186 11 20774523 20782616 ECH