Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2125 ATGGCTTCAacatttctttctcttcctcacTTTCTTTCTCCTAAATTCAACTTCATCACTGTAAATTCCCGACACGTTCCTTTCAGACCCTTGCTTCTTCATTCTCTATCTACTTCTCCATTGCGTACTCTTCGACCTCCTTTGGCTATTGGCCCCGACGGTAAGTACTATCCAAACCCAGCAGACGATGACCCACCGGAGGCGCTAGAGGATTCTGATCATGGGGTTTCCAAATTTCAGCAAATTGAGCGCCAAGCCGCCCGTGCTCGCCAGCTCGAGGAAGAGGATTTCAAGAAGAACCAGTCAACATTCCTCGCTGCCCTTGCCGATGTCGAAGATGCTCCCGACAATCCTGCTTCTCTGGATTCTGAGAATTCCGGGGACGATTTGTTCGGTGAAATCGATAAAGCCATCGCCATGAAGCGAAAGGAGTTTGTGAAGCAGGGGCTTCTAGAGCCGAACCCCAGGAAAGAGAAGACGGTTTCGAATGCGGATGTTGAGGGACTTGATGAGCTGCAACCTGAGGAGGTCGTTGATTTGGAGGAAATTGATGAGCTTCAGGGGCTCAGGATGATTTCCGACGATTCGGATGCTGAGGGCTCGGACAAATTCGGCGATGAGAATTCTTCGTTTGATTTAGATTTTGACATTTACGGGAAAAGTAAGGCTAGAATTGTGGAACCCAAATTTAAAATGACTTTGGCTGAGCTTTTGGATGAGAGCAAGGTAGTGCCTGTGTCAGTGTATGGTAATTTGGAGGTTGAGATCACTGGAATTCAGCATGATTCAAGGCTAGTTAGTTCAGGTGATTTGTTTGTATGCTGTGTTGCACAAAAGACTGATGGTTATTTGTACTTGACTGAGGCAGACAAGAGAGGGGCAGTGGCTGTGGTGGCTAGTGAAGAGATAGACATAGAAGATACCTTGGGTTGTAAGGCATTGGTGATTGTAGAAGATACTAATGCGATTCTCCCTGTGTTGGCTGCTTCCTTTTACAAGTATCCATCAAAAAACATGGCAGTAATTGGAATAACTGGGACATATGGCAAAACAACCACGGcatatttgataaaaaacaTGTATGAAGCAATGGGACTACGAACAGGAATGTTGAGTTCAGTTGCTTATTACGTGCATGGGGATAATAAATTGGAGTCACCAAACACCACCCCAGATGCTGTTTTAGTTCAGAACTTGATGGCAAAGATGCTTCACAATGGAACTGAATCATTAGTCATGGAGACTTCTTCTCTGGAACTAGCCCAAGGAAAGTGCAATGAAGTTGATTTTGATATTGCAGTGTTTACAAATTTGACAAGGGACCATATCGATCTCCATGGGTCTGAAGAAGCATACAAAGATGCTACGGCTAAACTATTCTCGAGAATGGTGGACCCTGAACGGCACAGGAAAGTTGTAAACATTGATGATTCAAATGCAGCGTTCTTTGTTTCGCAGGGGAACCCAGAAGTTCCTGTTGTAACATTTGCACTGGAGAATAAGAATGCAGATGTTCATCCCCTGAAGTTTGAGCTATCTCTGTTTGAGACGCAGGTCTTGGTTAATACCCCCAGTGGCATACTAGAAATTTCATCAGGTTTACTTGGAAGACATAATATTTACAACATTCTTGCTGCCGTGGCAGTTGGTGTTGCTGTTGGGGCACCTTTAGAGGACATTGTAAGAGGGATTGAAGAAGTCGATGCAGTTCCTGGTCGGTGTGAGTTAATTGATGAGGAACAGGCCTTTGGGGTAATAGTGGACTATGCTCAGACGCCTGATGCCTTGTCTAGATTGCTTGATTTCGTAAGAGAGCTTGGACCTCGGAGGATTATAACAGTGTTCGGTTGTTGTGGTGAGAGTGACAGAGGGAAAAGACCCATGATGACCAAGATAGCGACAGATAAAAGTGATGTGACCATTCTGACATCTGACAATCCAAAGAAGGAAGATCCATTGGATATATTGGATGATATGTTGGCTGGGGTAGGATGGACAATGCAGGAGTACCTGAAATATGGGGAAAATGACTACTACCCACCTCTTGCAAATGGTCATAGGCTTTTTCTTCATGATATTAGACGCGTTGCGGTACGAGCTGCAGTTGCTATGGGAGAGGAGGGTGATGTGGTTGTTGTTGCTGGCAAAGGCCATGAAACATATCAAGTAGAAGATGAGAAGACAGAGTTCTTCGATGATCGAGAAGAGTGCCGAGAGGCATTGCAGTATGTTGACGAGCTTCACCAAGCCGGAATTGATACAAGCGAATTTCCATGGCGGTTACCAGAGAGCCACTGA 2298 0.4452 MASTFLSLPHFLSPKFNFITVNSRHVPFRPLLLHSLSTSPLRTLRPPLAIGPDGKYYPNPADDDPPEALEDSDHGVSKFQQIERQAARARQLEEEDFKKNQSTFLAALADVEDAPDNPASLDSENSGDDLFGEIDKAIAMKRKEFVKQGLLEPNPRKEKTVSNADVEGLDELQPEEVVDLEEIDELQGLRMISDDSDAEGSDKFGDENSSFDLDFDIYGKSKARIVEPKFKMTLAELLDESKVVPVSVYGNLEVEITGIQHDSRLVSSGDLFVCCVAQKTDGYLYLTEADKRGAVAVVASEEIDIEDTLGCKALVIVEDTNAILPVLAASFYKYPSKNMAVIGITGTYGKTTTAYLIKNMYEAMGLRTGMLSSVAYYVHGDNKLESPNTTPDAVLVQNLMAKMLHNGTESLVMETSSLELAQGKCNEVDFDIAVFTNLTRDHIDLHGSEEAYKDATAKLFSRMVDPERHRKVVNIDDSNAAFFVSQGNPEVPVVTFALENKNADVHPLKFELSLFETQVLVNTPSGILEISSGLLGRHNIYNILAAVAVGVAVGAPLEDIVRGIEEVDAVPGRCELIDEEQAFGVIVDYAQTPDALSRLLDFVRELGPRRIITVFGCCGESDRGKRPMMTKIATDKSDVTILTSDNPKKEDPLDILDDMLAGVGWTMQEYLKYGENDYYPPLANGHRLFLHDIRRVAVRAAVAMGEEGDVVVVAGKGHETYQVEDEKTEFFDDREECREALQYVDELHQAGIDTSEFPWRLPESH 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2125 765 MobiDBLite consensus disorder prediction 45 74 - -
Sto11g2125 765 Gene3D - 335 573 IPR036565 GO:0005524|GO:0009058
Sto11g2125 765 Gene3D - 233 333 - -
Sto11g2125 765 Pfam Mur ligase middle domain 344 549 IPR013221 GO:0005524|GO:0009058|GO:0016881
Sto11g2125 765 Hamap UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 232 741 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Sto11g2125 765 SUPERFAMILY MurE/MurF N-terminal domain 232 335 IPR035911 -
Sto11g2125 765 SUPERFAMILY MurD-like peptide ligases, catalytic domain 335 567 IPR036565 GO:0005524|GO:0009058
Sto11g2125 765 TIGRFAM murE: UDP-N-acetylmuramyl-tripeptide synthetase 254 742 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Sto11g2125 765 PANTHER UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE MURE HOMOLOG, CHLOROPLASTIC 210 755 - -
Sto11g2125 765 SUPERFAMILY MurD-like peptide ligases, peptide-binding domain 570 742 IPR036615 GO:0009058|GO:0016881
Sto11g2125 765 PANTHER MUR LIGASE FAMILY MEMBER 210 755 - -
Sto11g2125 765 Gene3D - 575 752 IPR036615 GO:0009058|GO:0016881
Sto11g2125 765 Pfam Mur ligase family, glutamate ligase domain 570 653 IPR004101 GO:0009058|GO:0016881
Sto11g2125 765 Pfam Mur ligase family, catalytic domain 255 332 IPR000713 GO:0009058|GO:0016881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2125 - - zju:107429847 1200.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2125 11 20146447 20150995 Sto11g2125 11 20146447 20150995 ECH