Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2094 ATGAACAACTTCAAGTTAGGTGTGGATGTGGTTAGTGCTCACAATCTCCTACCTAAAGATGGGCAAGGATCATCAAGTGCCTTTGTAGAACTTTACTTTGATGGCCAGAAGTTCCGTTCCACCATAAAAGAAAAGGACCTAAACCCAGTTTGGAATGAGAGCTTCTACTTCAACATATCTGACCCTTCAAATCTCCACTATCTCACTCTTGATGCCTATGTCTACAACCACGCCAGAGGCTCTAACTCCCCTTCGTTTCTAGGGAAGGTGACCCTCACTGGGACTTCCTTCGTCCCTCTTTCGGACGCCGTTGTCCTGCACTATCCCCTCGAGAAGCGCGGCATTTTCTCGCGTGTTCGCGGCGAGATCGGCCTCAAAGTGTACATCACAAATGATCCAACCATAAAGTCCTCAATTCCAATTGCTTCTTCTGCTGCTGTCTCATCATCATCGGTTCATGCTGAAACTCACAACGCACAAACTCCAAATCCATTAATGACAAACTCTTTGTCCAAGGCTGAGGCAAGACACACATTTCATCATCTCCCAAATCCAAACCATCCGGCTCATCATCCGCAACATCATGATACTCATTATGTGACAAAATATGAAGCTGATGAGATGAAATCCGATCCTCTTCCTCCGAAGCTGGTTCGGATGCATTCGGCTGCATCGGTTCAACCGGTGGATTATGCGCTCAAGGAGACAAGCCCGTTCCTCGGCGGTGGAAGAGTCGTTGGTGGTCGTGTGGTTCATAAAGACAAGACAGCAAGTACGTATGACCTTGTGGAAAGAATGTACTTTCTCTATGTAAGGGTAGTGAAGGCTCGTGATCTTCCTGGTATGGATGTTACCGGGAGTCTTGATCCATTCGTTGAGGTGAGAATTGGGAACTACAAAGGTATCACCAAGCACTTTGACAAGAACCAATACCCAGAGTGGAATCAAGTGTTTGCTTTTTCAAAGGAGAGAATGCAGGCTTCTGTACTGGAAGTTGTGATCAAGGATAAGGACCTTGTGAAAGATGATTTTGTGGGGATTGTGAGGTTTGACATCAATGAAGTTCCCTTGAGAGTTCCCCCGGATAGTCCCCTCGCGCCGGAATGGTACCGGCTCGAGGACAAGAAAGGGGAGAAAATCACAAAGGGGGAGCTGATGCTTGCAGTGTGGATTGGTACACAAGCAGACGAAGCATTTTCTGATGCTTGGCATTCAGACGCAGCCACACCTATTGACACCACACCCGCCGCCTCCGCCGTGATCCGCTCGAAGGTCTACCACGCGCCGAGGCTGTGGTATGTTCGCGTGAACGTCGTGGAGGCGCAAGACTTGGTTCCCACGGAGAGAAACCGCTTCCCAGATGTCTATGTAAAGGCACACATAGGAAACCAAGTGTTGAAAACAAAAACAGTCCCAGCAAGATCGTTAAACCCTCTTTGGAACGAGGATCTTTTGTTTGTTGCTGCCGAACCTTTTGAAGACCACCTAGTACTGTCCGTGGAGGACCGGGTTGCGCCGGGTAAAGACGAGATCATTGGGAGGCTGATCATCCCGTTGAACGCAATAGACAGACGCGCTGATGATAGAATCATACATTCCAGATGGTTCAATCTGGAAAAGCCAATCGCTGTGGATGTTGATCAactgaagaaagaaaaattctCCAGCAGAATCCACCTCCGTGTGTGTCTAGACGGAGGGTATCACGTTCTTGATGAGTCCACTCACTACAGTAGTGACCTTCGTCCCACGGCGAAACAACTATGGAAGCCACCAATTGGGGTTCTAGAGCTTGGAGTGCTGAATGCTGTAGGACTCCACCCTATGAAAACAAGGGATGGAAGGGGCACTTCTGATACATACTGTGTAGCAAAATATGGTCACAAATGGGTCAGAACACGAACCATTGTGGATAATTTGTGTCCCAAATACAACGAGCAGTACACTTGGGAGGTTTTTGACCCAGCCACGGTTCTAACCGTGGGTGTATTCGATAACAGCCATATAACTGTTGGCGAAAAGGGTTCTTCGAAAGACTTGAAAATCGGAAAGGTCCGGATCCGAATCTCGACTCTAGAAACGGGTCGGATCTATACTCACTCGTACCCGTTGCTAGTTCTTCACCCGACCGGGGTTAAGAAAATGGGCGAACTACACATGGCAATACGATTCTCCTGCACTTCTTTCGCCAACATGCTTTATTTATACTCACGCCCGCTCCTCCCCAAGATGCACTACGTCAGACCCTTCTCCGTCGTCCAGCTCGACATGCTACGTCACCAGGCCGTCAACATCGTGGCGGCCCGGCTCGGCCGGGCCGAGCCGCCGCTGCGCAAGGAGGTAGTGGAATACATGTCTGACGTGGACTCACACCTGTGGAGCATGAGACGGAGCAAGGCGAATTTCTTCCGAGTCATGACGGTTTTCTCCGGTTTATTCGCGGTCGGGAAGTGGTTCGGGGATATATGCACGTGGAGGAATCCCGTCACGACTATCCTCGTCCACGTCCTCTTCCTCATGCTGGTATGCTTCCCGGAGTTAATCTTACCCACAATTTTCCTCTACATGTTTCTTATCGGCGTGTGGAACTTCCGGTACCGTCCGAGGTATCCTCCGCACATGAATACGAGGATCTCACAGGCCGAGGCGGTGCACCCGGATGAGCTGGACGAGGAGTTCGACACGTTTCCCACGTGCCAGAACCCTGATGTGGTGAGGATGAGGTATGACCGGCTGAGGAGCGTGGCGGGAAGGATTCAGACGGTGGTCGGTGATTTGGCGACACAAGGAGAGAGGTTCCAGGCTTTGTTGAGCTGGAGGGACCCACGTGCTACGGCCATTTTTATTACCTTTTGTTTGGTGGCTGCTCTGGTGTTATATGTTACGCCTTTTCAAGCGGTGGCTGCTTTGGGTGGGTTCTACGTGATGAGGCATCCTAGGTTTCGTCATAGGTTGCCTTCTATACCCATCAACTTCTTCCGTAGGTTGCCTGCCAGAACAGACAGTATGTTGTAG 3015 0.4982 MNNFKLGVDVVSAHNLLPKDGQGSSSAFVELYFDGQKFRSTIKEKDLNPVWNESFYFNISDPSNLHYLTLDAYVYNHARGSNSPSFLGKVTLTGTSFVPLSDAVVLHYPLEKRGIFSRVRGEIGLKVYITNDPTIKSSIPIASSAAVSSSSVHAETHNAQTPNPLMTNSLSKAEARHTFHHLPNPNHPAHHPQHHDTHYVTKYEADEMKSDPLPPKLVRMHSAASVQPVDYALKETSPFLGGGRVVGGRVVHKDKTASTYDLVERMYFLYVRVVKARDLPGMDVTGSLDPFVEVRIGNYKGITKHFDKNQYPEWNQVFAFSKERMQASVLEVVIKDKDLVKDDFVGIVRFDINEVPLRVPPDSPLAPEWYRLEDKKGEKITKGELMLAVWIGTQADEAFSDAWHSDAATPIDTTPAASAVIRSKVYHAPRLWYVRVNVVEAQDLVPTERNRFPDVYVKAHIGNQVLKTKTVPARSLNPLWNEDLLFVAAEPFEDHLVLSVEDRVAPGKDEIIGRLIIPLNAIDRRADDRIIHSRWFNLEKPIAVDVDQLKKEKFSSRIHLRVCLDGGYHVLDESTHYSSDLRPTAKQLWKPPIGVLELGVLNAVGLHPMKTRDGRGTSDTYCVAKYGHKWVRTRTIVDNLCPKYNEQYTWEVFDPATVLTVGVFDNSHITVGEKGSSKDLKIGKVRIRISTLETGRIYTHSYPLLVLHPTGVKKMGELHMAIRFSCTSFANMLYLYSRPLLPKMHYVRPFSVVQLDMLRHQAVNIVAARLGRAEPPLRKEVVEYMSDVDSHLWSMRRSKANFFRVMTVFSGLFAVGKWFGDICTWRNPVTTILVHVLFLMLVCFPELILPTIFLYMFLIGVWNFRYRPRYPPHMNTRISQAEAVHPDELDEEFDTFPTCQNPDVVRMRYDRLRSVAGRIQTVVGDLATQGERFQALLSWRDPRATAIFITFCLVAALVLYVTPFQAVAALGGFYVMRHPRFRHRLPSIPINFFRRLPARTDSML 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2094 1004 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 139 IPR035892 -
Sto11g2094 1004 Gene3D C2 domain 1 130 IPR035892 -
Sto11g2094 1004 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 267 407 IPR035892 -
Sto11g2094 1004 Pfam Plant phosphoribosyltransferase C-terminal 849 1004 IPR013583 -
Sto11g2094 1004 Pfam C2 domain 595 704 IPR000008 -
Sto11g2094 1004 Pfam C2 domain 5 94 IPR000008 -
Sto11g2094 1004 Pfam C2 domain 432 526 IPR000008 -
Sto11g2094 1004 Pfam C2 domain 269 363 IPR000008 -
Sto11g2094 1004 CDD C2C_MCTP_PRT_plant 433 583 - -
Sto11g2094 1004 CDD C2D_MCTP_PRT_plant 595 721 - -
Sto11g2094 1004 ProSiteProfiles C2 domain profile. 415 536 IPR000008 -
Sto11g2094 1004 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 1004 - -
Sto11g2094 1004 CDD C2A_MCTP_PRT_plant 5 130 - -
Sto11g2094 1004 ProSiteProfiles C2 domain profile. 250 370 IPR000008 -
Sto11g2094 1004 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 432 585 IPR035892 -
Sto11g2094 1004 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 4 1004 - -
Sto11g2094 1004 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 594 732 IPR035892 -
Sto11g2094 1004 ProSiteProfiles C2 domain profile. 577 702 IPR000008 -
Sto11g2094 1004 SMART C2_3c 433 531 IPR000008 -
Sto11g2094 1004 SMART C2_3c 268 364 IPR000008 -
Sto11g2094 1004 SMART C2_3c 5 106 IPR000008 -
Sto11g2094 1004 SMART C2_3c 595 701 IPR000008 -
Sto11g2094 1004 CDD C2B_MCTP_PRT_plant 268 393 - -
Sto11g2094 1004 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Sto11g2094 1004 Gene3D C2 domain 414 564 IPR035892 -
Sto11g2094 1004 Gene3D C2 domain 250 391 IPR035892 -
Sto11g2094 1004 Gene3D C2 domain 578 726 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2094 Sto-Chr11 19829132 19832176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2094 168 1004 Lipid Metabolism Gene Families AT4G11610 78.763 0.0 1417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2094 - - gmx:100777951 1740.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2094 11 19829132 19832176 Sto11g2094 11 19829132 19832176 ECH