Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2089 ATGGAGGAAGCTCCAGTGTCTGCTACTACTAACACATGCTGGAGCAACGTAGTGAAGACTCCACAGCCACCACCACCCAAACCTGCTCAAGATGATCCTCTCCAGGCTGGCCGAATCTTCGTTGAGAGCTGCAAATCCTCCAATGGTATATCCGTCGCTGTTGTGGACGCCAACGCCATTATCGCCGGCGGAGAGAGGCTCCACAACTGCGCCGATAAGTTCGTCTCCGTCCCCGAAGTCATGGAGGAAATCCGCGATCCCGTCTCACGCCATAGACTCTCGTTCATTCCCTTCACTGTCGAGACCATGGAACCCTCCCCTGAGGCCATGAATAAAGTTGTCAAATTTGCTAGGGCCACTGGTGATCTACAGACTCTTTCAGAAGTTGATCTCAAACTCATAGCTCTAACATATACTTTGGAGGCTCAAATTCATGGAACAAACCATCTCAGGGACATCCCACCTCCTGTCCAAATGGTAAATGTCAAGAGGTTGCCCGAAAAGGACATGCCTGGATGGGGTTCAAATGTGCCTAATTTGGAAGAGTGGGAAGCATTAGAGCATGAGACTGAGGACAAATCAAATTCCAATTCAAGAATACTTCCTTTGCGAGACTTAAACTTGAACATTGTTACTCAGGATGACCATTCTGAAGATGGTTCTGTAGGAATTAAGAGTGAAGCTCCTTGTGAGAATCTAGATGGTGTTGATCATGGACAACTTGATGATAATGCTGGCATTATCCCACATTCTGAGAATGGAATTCTGAAGCAAATGAACTTGGAAGAAGCTTCATTTGAAGTTCTTGATGGAGAAAACAAACTTGATACATGTTCTGAAGAACTCCAGTCAAATGGGTCTAGACTTGTGGAAATTGTATCAAATATTGATGAAACCATGGCCCCTAAACCATGTGATCTGGATACAGCTGATGGCGAGTCAAATCATTTTGAGGTTGCAAGTGAGACCAGTGAAGCTGCTGATTTTTCATTTGCTGATGATGATGGTAGTGAGCAAAGTTGGATGCTTAGATCTTTGTCTGAGTCTAGTGTAGCTTGTGTGACTGGTGACTTTGCAATGCAAAATGTCCTTCTTCAGATGGGTTTGCGCTTGCTAGCACCTGGAGGAGCACAAATACACCAGCTGCATAGATGGATACTCAGGTGTCATGCCTGCTACACTGTTACTGCTGAAATTGGGAGGATTTTTTGTCCAAAATGTGGCAATGGTGGCACCTTACGCAAGGTAGCTGTTACAGTTGGTGAAAATGGAGCAGTGTTGGCAGCCCGTCGACCACGAATTACATTGCGTGGTACCAAGtacctttggtacccccaacgtttgcgcTTTTCACTTCCTTTACCTCAAGGAGGAAGGGATGCAGTCACAAAGAACCTCATTCTCCaagaaaggcAACAAGCAGATAAGAGAACTCCTTTCCAGCCTCCGGTGAGGAAAGCATTAGCAGTTTTCAGTGGAAAGAGAAATCCAAATGACAATCACTTCTCACGCTCTAAGCAAAACCTCACACAACGTAATCAGTCACCTTGGAAGTGTTTTTACCCCCTTATGAATGCATGA 1581 0.444 MEEAPVSATTNTCWSNVVKTPQPPPPKPAQDDPLQAGRIFVESCKSSNGISVAVVDANAIIAGGERLHNCADKFVSVPEVMEEIRDPVSRHRLSFIPFTVETMEPSPEAMNKVVKFARATGDLQTLSEVDLKLIALTYTLEAQIHGTNHLRDIPPPVQMVNVKRLPEKDMPGWGSNVPNLEEWEALEHETEDKSNSNSRILPLRDLNLNIVTQDDHSEDGSVGIKSEAPCENLDGVDHGQLDDNAGIIPHSENGILKQMNLEEASFEVLDGENKLDTCSEELQSNGSRLVEIVSNIDETMAPKPCDLDTADGESNHFEVASETSEAADFSFADDDGSEQSWMLRSLSESSVACVTGDFAMQNVLLQMGLRLLAPGGAQIHQLHRWILRCHACYTVTAEIGRIFCPKCGNGGTLRKVAVTVGENGAVLAARRPRITLRGTKYLWYPQRLRFSLPLPQGGRDAVTKNLILQERQQADKRTPFQPPVRKALAVFSGKRNPNDNHFSRSKQNLTQRNQSPWKCFYPLMNA 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2089 526 PANTHER - 254 476 - -
Sto11g2089 526 PANTHER - 474 506 - -
Sto11g2089 526 PANTHER - 11 239 - -
Sto11g2089 526 Pfam PIN domain of ribonuclease 54 140 IPR033411 -
Sto11g2089 526 Gene3D - 373 444 IPR036283 -
Sto11g2089 526 PANTHER RNA-BINDING PROTEIN NOB1 254 476 IPR039907 -
Sto11g2089 526 PANTHER RNA-BINDING PROTEIN NOB1 11 239 IPR039907 -
Sto11g2089 526 PANTHER RNA-BINDING PROTEIN NOB1 474 506 IPR039907 -
Sto11g2089 526 Pfam Nin one binding (NOB1) Zn-ribbon like 379 441 IPR014881 -
Sto11g2089 526 CDD PIN_Nob1-like 54 165 IPR033411 -
Sto11g2089 526 Gene3D - 44 159 - -
Sto11g2089 526 MobiDBLite consensus disorder prediction 1 33 - -
Sto11g2089 526 MobiDBLite consensus disorder prediction 1 18 - -
Sto11g2089 526 PIRSF Nob1 473 510 IPR017117 GO:0000469|GO:0004521|GO:0042274
Sto11g2089 526 PIRSF Nob1 35 478 IPR017117 GO:0000469|GO:0004521|GO:0042274
Sto11g2089 526 SUPERFAMILY NOB1 zinc finger-like 379 441 IPR036283 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2089 K11883 - egr:104443793 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2089 11 19731655 19735797 Sto11g2089 11 19731655 19735797 ECH