Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2025 ATGATGTTCACCGGCCTCTTGCTCTACTCTCGCTCCATCATCTCCATGCTCTTCCTCGGCCGCCTCGGCGGGCTCGCCCTCGCCGGCGGCTCCCTCGCCATCGGATTCGCCAACATCACCGCCTACTCCGTCCTCTCCGGCCTCTCCATGGGAATGGAGCCCATTTGCGGCCAAGCCTTCGGAGCCAAAAGATTCAAACTTTTAGGCCTCACATTGCAAAAAaccatcctcctcctcctcctaacCTCCACCCTCATCTCCTTCCTATGGCTCAACATGAAAAAGATCCTTCTTTTCTTCGGCCAAGACCAAGAAATAGCCAACCAAGCCCAAATTTACATCCTTTATTCCCTCCCCGATCTTATCTCACAATCTTTCCTTCACCCACTTCGTATCTACCTCCGAACTCAATCCATAACCCTCCCTTTAACCTTCTGTGCTTCTCTTTCCATCCTCCTCCACATCCCCATCAACTACCTCCTCGTCTCTGTTCTTGAACTCGGAATCAAAGGCATCGCCTTGGGCTCTGTTTGGACGAACCTAAATCTCGTGGGGTCCCTCATTTTTTACATCAAAATCTCACGCACGCATGAGAAAACATGGAGTGGGGTCTCTTCGAGTTGCTTCAAGAATTGGGAGCCACTAATCAAACTCGCAATCCCAAGCTGCATTTCCCTCTGCCTCGAATGGTGGTGGTACGAAATCATGATCTTACTCTGTGGATTGCTTCAGAACCCCAAAGCCACCGTTTCTTCGATGGGGATTCTCATCCAAGTCACATCGTTGATCTACATTTTCCCTTCCTCCCTGAGCTTCGGCGTCTCGACACGTGTCGGCAACGAATTGGGCGCGAGAAACCCCCAGAGGGCGAGGCTCTCCGCCATTGTGGGACTCTGTTTCAGCTTCGTTCTGGGGTTCTCGGCATTGGGGTTCTCGATGTTGGTGAGGGAATCTTGGGGCGGAATCTTCACGGGAGATGAGGAGGTGATGGGGTTGACGAGGATGGTTCTGCCGATCATCGGAGTCTGCGAGATCGGGAATTGTCCCCAAACGACGGCGTGTGGGGTGTTGAGGGGGACGGCGAGGCCGAAGGGGGCGTGTGTGGTGgcgatgatggtggtggtgggtcgGACGAATTGGGAAGGGCAAGTGGAAAGAGCCAAGGAGCTTACTTTGgggagtgaagaagaagaaaaaggaggagAAGACGAAGATGATGGTGATGGAAAGGACTCAAAGGAGGACTGTGGTTTACTAGTATGA 1263 0.4964 MMFTGLLLYSRSIISMLFLGRLGGLALAGGSLAIGFANITAYSVLSGLSMGMEPICGQAFGAKRFKLLGLTLQKTILLLLLTSTLISFLWLNMKKILLFFGQDQEIANQAQIYILYSLPDLISQSFLHPLRIYLRTQSITLPLTFCASLSILLHIPINYLLVSVLELGIKGIALGSVWTNLNLVGSLIFYIKISRTHEKTWSGVSSSCFKNWEPLIKLAIPSCISLCLEWWWYEIMILLCGLLQNPKATVSSMGILIQVTSLIYIFPSSLSFGVSTRVGNELGARNPQRARLSAIVGLCFSFVLGFSALGFSMLVRESWGGIFTGDEEVMGLTRMVLPIIGVCEIGNCPQTTACGVLRGTARPKGACVVAMMVVVGRTNWEGQVERAKELTLGSEEEEKGGEDEDDGDGKDSKEDCGLLV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2025 420 Pfam MatE 221 372 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto11g2025 420 Pfam MatE 2 160 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Sto11g2025 420 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 365 - -
Sto11g2025 420 CDD MATE_eukaryotic 1 364 IPR045069 GO:0042910|GO:1990961
Sto11g2025 420 MobiDBLite consensus disorder prediction 386 420 - -
Sto11g2025 420 PANTHER PROTEIN DETOXIFICATION 49 1 365 - -
Sto11g2025 420 MobiDBLite consensus disorder prediction 396 410 - -
Sto11g2025 420 TIGRFAM matE: MATE efflux family protein 9 375 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2025 Sto-Chr11 19071862 19073244 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2025 K03327 - qsu:112003859 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2025 11 19071862 19073244 Sto11g2025 11 19071862 19073244 ECH