Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1980 ATGTCACAGCTGAAGACTGCCTCGCACATTGACAATATTCCCTCCACTCCAGGGAAATTCAAGACCGAGAAATCTCCCTACATTCATCGACTCAGAATCCATTCTACTCTTTCCAAGCTCACTCTCTGGTCCTCTTTCTTCTTGGTcttcatcctcttcttcttccttctttcccCTCCCAATTcctctcctccttctccttcttcaccCTCCTCTCGCCGTGCCCTCGGCGACTCCTGGGGCGGACCCGATTGGGAGAAGCGGGTCAGCAAATCGGCGCGGAGGAACTCTGCTTCTGGTTTCACTGTGCTCGTCACCGGAGCCGCTGGCTTCGTCGGCACGCACGTGTCTCTCGCGTTGAAGCGACGCGGCGATGGCGTCCTCGGGCTTGATAATTTCAACCACTACTATGATCCCAACCTCAAACGCGCTCGTCAGAAGCTTCTTGACCGCGCTGGCGTCTTCGTCGTCGAAGGAGATATCAACGACGCCGCTCTGCTTCACAAGCTCTTCGATGTCGTGCCGTTTACTCACGTAATGCACCTCGCGGCGCAGGCGGGTGTACGGTACGCGATGCAGAATCCCAGTTCCTATGTGCATAGTAACATCGCTGGGTTTGTGAATCTTCTCGAAGTGTGTAAATCGGCGAATCCCCAACCTGCGATTGTGTGGGCGTCTTCTAGCTCCGTCTATGGGATTAATTCGAAGGTTCCATTCTCTGAGAAAGACAGGACGGATCAGCCAGCGAGTTTGTATGCTGCTACTAAGAAAGCAGGTGAAGAAATTGCACATACTTATAATCATATCTATGGGCTTTCAATTACTGGTTTGAGATTCTTCACAGTGTATGGTCCGTGGGGGCGTCCTGATATGGCATATTTCTTCTTCACCAAGGATATTCTTAAAGGGAAGCAGATCACCATTTTTGAGGCACCTGGTTTGGGAACTGTGGCGAGGGATTTCACCTACATTGATGATATTGTGAAAGGCTGTTTGGGGGCTTTGGATACTGCGAAGAAAAGTACTGGAAGTGGTGGGAAGAAGAAAGGATCTGCACAATTGAGGATTTTTAATCTGGGAAATACTTCACCTGTGCCTGTGAGTGAGCTTGTGAGCATATTGGAGAAGCTTCTGAAGGTGAAGGCTAAGAGGAAGATGTTGCCTATGCCCAGAAATGGAGATGTTAAGTTCACACATGCTAATATTAGCTTAGCACACAGGGAGCTTGGATACAGACCTACCACTGATTTGGAGACAGGACTGAGGAAGTTTGTACGGTGGTACCTTGATTTCTATTCTGGTTCTAAGAAGAAGAGTGCTTGGTGA 1326 0.4736 MSQLKTASHIDNIPSTPGKFKTEKSPYIHRLRIHSTLSKLTLWSSFFLVFILFFFLLSPPNSSPPSPSSPSSRRALGDSWGGPDWEKRVSKSARRNSASGFTVLVTGAAGFVGTHVSLALKRRGDGVLGLDNFNHYYDPNLKRARQKLLDRAGVFVVEGDINDAALLHKLFDVVPFTHVMHLAAQAGVRYAMQNPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGINSKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDILKGKQITIFEAPGLGTVARDFTYIDDIVKGCLGALDTAKKSTGSGGKKKGSAQLRIFNLGNTSPVPVSELVSILEKLLKVKAKRKMLPMPRNGDVKFTHANISLAHRELGYRPTTDLETGLRKFVRWYLDFYSGSKKKSAW 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1980 441 MobiDBLite consensus disorder prediction 63 83 - -
Sto11g1980 441 Pfam NAD dependent epimerase/dehydratase family 103 340 IPR001509 -
Sto11g1980 441 Gene3D - 102 433 - -
Sto11g1980 441 PRINTS Nucleotide sugar epimerase signature 129 145 - -
Sto11g1980 441 PRINTS Nucleotide sugar epimerase signature 319 334 - -
Sto11g1980 441 PRINTS Nucleotide sugar epimerase signature 354 369 - -
Sto11g1980 441 PRINTS Nucleotide sugar epimerase signature 394 411 - -
Sto11g1980 441 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 99 435 IPR036291 -
Sto11g1980 441 PANTHER UDP-GLUCURONATE 4-EPIMERASE 5 11 439 - -
Sto11g1980 441 PANTHER EPIMERASE-RELATED 11 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1980 Sto-Chr11 18631500 18632825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1980 4 440 Miscellaneous Gene Families AT4G00110 78.261 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1980 K08679 - fve:101298705 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1980 11 18631500 18632825 Sto11g1980 11 18631500 18632825 ECH