Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1955 atggatttgAAGTCGTCACATCATAACTCTCCTGTGATTACCGATCCTATTGCCATCATCAACAAGTCAAGACTAGGAATCCATTCTCCAAGCAGCACTAAGTACAATTCCAGAAGATCAACTCCAtctgctgctactactactactaccactCTCAATGATGTTCGCTTCAATGGCTGGCTTGATGCCATGAAAGCTTCTTCTCCTCCAAGGAAGAAGCAAACCAGACCTTTTAACTCTCACTCCCACCACCATCATCTTCCTCCTTCAACCGACCACCAAGACTATTCCTCCTGgttggtatgtatatatatatatatatcttccttTGTCCCACATCGAAAGCCACTTGATTACCCGTCGGCGTTGGATAGTTTCGGGAAACTGATAGAGAATGCGAGGAGTAAGAAGATTGCGGTGTTTCTGGATTACGATGGCACTCTCTCACCGATAGTGGATGATCCAGATTGTGCTTTCATGTCTGAAGCTATGCGTGGAACGGTGAGAAGCGTGGCCAACTATTTTCCCACGGCAATTATCAGTGGGAGAAGCCGGGACAAGgtttatgatttagtcaAACTAACGGAACTCTACTATGCTGGTAGTCATGGGATGGACATTATTGGGCCCGCCTCTCACACTCTCTTCAATAACCATCGAAACTGTGTTAAATCCATTGACCCACAGGGAAAGGATATAACTCTGTTTCAACCTGCAAGAGAATTCCTCCCTGTGATTGATGAGGTTTATAGAAAGCTGGTGGAGACCACTAAAGATATAGAAGGCGCAAAAGTTGAAAACCACAAGTTTTGCGTTTCCGTACATTATCGTAACGTAGAagaaaatAATTGGAGAGGTATTGGACAACGCGTGCATGACGTGTTGGAAGATTACCCTCTTTTACGTTCAACTCACGGACGGAAGGTTTTAGATGTTCGTCCTGTGATTGATTGGAACAAGGGAAAAGCAGTTGAGTTCTTACTTGACTCTCTCGGTCATGAAATTTCTGCAACTTCTGGTGGATTGGAAGAAGCAAGAAGAGCTCAAACACAACGGAGAGAAGCATTCGTTTTGAAATTCAGAATAACCCCTGGATCAATATTTTTGTTCATATCAGTCCCATTGATTTTCTTGGATTATTCATAA 1146 0.4058 MDLKSSHHNSPVITDPIAIINKSRLGIHSPSSTKYNSRRSTPSAATTTTTTLNDVRFNGWLDAMKASSPPRKKQTRPFNSHSHHHHLPPSTDHQDYSSWLVCIYIYISSFVPHRKPLDYPSALDSFGKLIENARSKKIAVFLDYDGTLSPIVDDPDCAFMSEAMRGTVRSVANYFPTAIISGRSRDKVYDLVKLTELYYAGSHGMDIIGPASHTLFNNHRNCVKSIDPQGKDITLFQPAREFLPVIDEVYRKLVETTKDIEGAKVENHKFCVSVHYRNVEENNWRGIGQRVHDVLEDYPLLRSTHGRKVLDVRPVIDWNKGKAVEFLLDSLGHEISATSGGLEEARRAQTQRREAFVLKFRITPGSIFLFISVPLIFLDYS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1955 381 TIGRFAM T6PP: trehalose-phosphatase 135 337 IPR003337 GO:0003824|GO:0005992
Sto11g1955 381 Pfam Trehalose-phosphatase 141 334 IPR003337 GO:0003824|GO:0005992
Sto11g1955 381 Gene3D - 140 329 IPR023214 -
Sto11g1955 381 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 1 333 - -
Sto11g1955 381 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 333 IPR044651 GO:0004805|GO:0005992
Sto11g1955 381 SUPERFAMILY HAD-like 139 332 IPR036412 -
Sto11g1955 381 MobiDBLite consensus disorder prediction 28 47 - -
Sto11g1955 381 Gene3D - 220 315 - -
Sto11g1955 381 MobiDBLite consensus disorder prediction 65 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1955 Sto-Chr11 18355443 18359817 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1955 K01087 - tcc:18606311 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1955 11 18355443 18359817 Sto11g1955 11 18355443 18359817 ECH