Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1953 ATGGCCAATGCATCTGGGTTCTTTACTCCTTCAGTTCCTAACCTAATAGGGAGGGTTCAGCGAATCTCCAAGAAAGTTTTCTGCTTTAGTGCTGTTGAAGGCGCTGCTGACAAGCATGCTTCCACTGTTTCAAACCCTTCTCAATCGAGGATTCCCAGGCTTGTCAGTAAAGGCTGCAAATTTGTTGGATGTGGTTCTGCTGTGCCAGCTCTTCAAATTTCTAATGATGAACTTGCCAGCATAGTTGATACTTCTGATGAATGGATAGCAACACGCACTGGGATTCGTAATAGACGAGTTCTTTCAGGCGAAGAGAACTTAACAACTTTAGCTGTGGAGGCAGCTGGGAAAGCTCTTCAGATGGCAAAGGTTGATCCTAATGATGTTGACCTAGTATTGATGTGCACATCTACTCCAGATGATCTTTTTGGTAATGCCCCTCAGATTCAAAGACAACTTGGCTGCAACAAATCATTGGCTTATGACATTACAGCTGCATGTAGTGGATTTTTGATGGGATTGATATCGGCTGCGTGTCACATCAGGGGGGGAGGATTTCAGAATGTTCTAGTAATTGGGGCCGATGCTCTTTCAAGATATGTTGATTGGACAGACAGAGGAACCTGTATTCTTTTTGGGGATGCTGCTGGTGCTGTACTAGTACAGGCTTGCAATAGTGAGGAAGACGGTTTATTCGGTTTTGACGTGAATAGTGATGGCACTGGTCATAGGCATTTGAATGCTAATATCAAAGAAAATGAGACGAATAATGCATTGGGTTCAAATGGTTCAGTGCTAGCTTTTCCTCCCAAACAGACTTCCTATTCATGCATTCAAATGAATGGAAAAGAAGTATTTCGGTTCGCTGTACGATGTGTGCCGCAGTCGATTGAATCTGCCCTAGAAAAGGCTGGTCTTCCGGCATCTAGCATTGATTGGTTACTTCTCCATCAGGCAAATCAGAGGATTATCGATGCAGTTGCGACACGGTTAGAAGTACCCCCAGAGAGGGTTATATCGAATTTGGCAAATTACGGGAACACAAGTGCGGCTTCCATTCCGTTGGCTTTAGACGAAGCAGTTCGGAGTGGGAAGGTGAAGGCCGGCCATACGATTGCTGCTGCAGGCTTTGGCGCTGGTCTTACTTGGGGATCGGCCATCGTTCGATGGGGCTGA 1176 0.4558 MANASGFFTPSVPNLIGRVQRISKKVFCFSAVEGAADKHASTVSNPSQSRIPRLVSKGCKFVGCGSAVPALQISNDELASIVDTSDEWIATRTGIRNRRVLSGEENLTTLAVEAAGKALQMAKVDPNDVDLVLMCTSTPDDLFGNAPQIQRQLGCNKSLAYDITAACSGFLMGLISAACHIRGGGFQNVLVIGADALSRYVDWTDRGTCILFGDAAGAVLVQACNSEEDGLFGFDVNSDGTGHRHLNANIKENETNNALGSNGSVLAFPPKQTSYSCIQMNGKEVFRFAVRCVPQSIESALEKAGLPASSIDWLLLHQANQRIIDAVATRLEVPPERVISNLANYGNTSAASIPLALDEAVRSGKVKAGHTIAAAGFGAGLTWGSAIVRWG 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1953 391 Gene3D - 57 391 IPR016039 GO:0016746
Sto11g1953 391 PANTHER 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 1 391 - -
Sto11g1953 391 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 161 240 IPR013751 GO:0004315|GO:0006633
Sto11g1953 391 PANTHER 3-OXOACYL-(ACYL CARRIER) SYNTHASE III 1 391 - -
Sto11g1953 391 TIGRFAM fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 59 390 IPR004655 GO:0004315|GO:0006633
Sto11g1953 391 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 301 390 IPR013747 -
Sto11g1953 391 CDD KAS_III 58 388 - -
Sto11g1953 391 Hamap 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 57 390 IPR004655 GO:0004315|GO:0006633
Sto11g1953 391 SUPERFAMILY Thiolase-like 60 390 IPR016039 GO:0016746
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1953 1 390 Acyl Lipid Metabolism Gene Families AT1G62640 74.939 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1953 K00648 - gmx:100813007 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1953 11 18332420 18340908 Sto11g1953 11 18332420 18340908 ECH