Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1948 ATGCGGGTGAGAGAAATGCATCCTCTCTGCTGTATCTCTCTGGAGAGTCCCGGAATCGGGAACCAATCTCCGGAGGCGTCGCCCTCGAGGACTCGGAGTCTTCCGGCGAGTATCGCGGCCGTTGGATCTGACGGCAATGCCGGCGGAGGATGGAGCCAGGGATCGGAGCCTACGGTCGCTGGGATACTCTACAAGTGGACCAATTACAGCAAAGGATGGAGATCCCGATGGTTCCTGTTGAGGAACGGCGTCCTCTCTTATGCCAAGATCCGGTGGCCGGAGAATCTCAATCTTCTCACGCCGGCGTATGACGTCAGATTAATTGGCGAAATTTCCACCAACCGGTTGGCGAGGATGGACAGCGGGAGTACCATTCGACGGAAGCACCAGAAATCTTCCTCTGGCGTAGTTCATCTCAAGATTTCGTCATTTAGAGAGAGCAAATCAGATGATCGGCGGTTCTATATATTTACTGCTACTAAGACTCTCCATCTCAGAACTGATTCAAGGAAAGATCGTGTGGCATGGATACAAGCTTTGGAATCAACTCGTAACTTGCATCCACTTAGATCACTGAATCATAATATCTTGCCGGTACCGAAAGATATTTCTATATCAACCGAGGACCTGAAAAAGCGCTTACTTGAAGAAGGAACCAATGAGAACCTTGTGAAGGAGTGCGAACAAATAATGCTCTCAGAGTTTTCGAAAATGCAAGGGCAGCTTACAATTCTTTGTGAAGAGCGATCAAATTTGCTTGATACAATAAGGCAGTTGGAGGCGGCCAATATTGAACCTGAGGCCTCTGGAATCCATGATGGTGAATACCAGTTGACAAAACATGAATTTTCAAGTATAGGACGTGGCAAATATAGTGAATGCAGTACAACAGAATCATCCGAAGATATTGAGAAACAGGAGATGGAAGAAGGGTCAGATGAAGATGAAATCTCTTACTATGATACTGCAGAGTACTTTACAGAACCAGGTTTTAGGTGTGCGTCAACAGGACCCTTGGTTTCAGCGGATGAGTCTCCAGAAACTAATGTGCAATGCATTGGCGTGGAGAAAATACAGCCTGAGAAGGCAGTCGCCATTTCTAGGTATCCTCAGATACTAAGACGAAGAAAGCTTCCTGATCCTGTGGAGAAAGAGAAGGGTGTTAGTCTTTGGTCTATGATCAAAGATAATGTGGGAAAGGATCTCTCACGCGTTTGTCTTCCTGTATACTTTAATGAGCCAATATCTTCCCTTCAGAAGTGTTGTGAGGACCTCGAATACTCTCACCTTTTGGATCAAGCTTATGAGTATGGAAAATCAGGAAACAATCTCCTTCGGGCACTCAATGTTGCTGCCTTTGCAATTTCTGGATATGCATCATCTGAAGGTCGTCATTGTAAACCATTTAATCCCTTGTTAGGAGAAACTTATGAAGCTGATTTTCCTGATAAAGGAATTCGCTTCTTTTCTGAGAAGGTCAGTCACCATCCAACTCTCATTGCCTGCCACTGTGAAGGTAGAGGATGGAAGTTTTGGGGCGACAGCAACATCCATTCAAAGTTTTGGGGTAGGTCAATTCAGCTTGATCCAGTTGGAGTTCTGACCCTAGAGTTTGATGATGGTGAAATATTTCAATGGAGCAAGGTTCATGGATTTATTGAAGATGGTATGGGGAAAAAAGTTGCTACATTATTTGGCAAGTGGGATGACAGCATGTATTATGCTATTGGTGATGTGAATGTAAAGCCAAAAGATTTCACATCATCAGATGCATCTTTGTTGTGGAAAAGAACTAAGCCTCCTGCTAATCTCACTCGGTACAATTTGACATCTTTTGCTATCACTTTGAACGAGCTTCTTCCAGGATTGAAGGAGAAGCTCCCGCCCACGGATTCCAGGTTGAGACCAGATCAGCGACATCTAGAGAATGGGGAATACGAAAAGGCTAATGCTGAGAAACAAAGATTGGAAAAGAGGCAAAGAATGTCAAGGAAAATGCAAGAAAATGGTTGGAAGCCTAAATGGTTTCAAAGAGATGGTGCAAATGGAACTTTTCGTTATGTAGGCGGGTACTGGGAAGCCCGAGAGCAAGGAAAATGGGATGCATGCCCAAATATATTTGGTGAATTTAATGGAGACTCAATGGCTCCTTTAGATGCATCTTGA 2166 0.4455 MRVREMHPLCCISLESPGIGNQSPEASPSRTRSLPASIAAVGSDGNAGGGWSQGSEPTVAGILYKWTNYSKGWRSRWFLLRNGVLSYAKIRWPENLNLLTPAYDVRLIGEISTNRLARMDSGSTIRRKHQKSSSGVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALESTRNLHPLRSLNHNILPVPKDISISTEDLKKRLLEEGTNENLVKECEQIMLSEFSKMQGQLTILCEERSNLLDTIRQLEAANIEPEASGIHDGEYQLTKHEFSSIGRGKYSECSTTESSEDIEKQEMEEGSDEDEISYYDTAEYFTEPGFRCASTGPLVSADESPETNVQCIGVEKIQPEKAVAISRYPQILRRRKLPDPVEKEKGVSLWSMIKDNVGKDLSRVCLPVYFNEPISSLQKCCEDLEYSHLLDQAYEYGKSGNNLLRALNVAAFAISGYASSEGRHCKPFNPLLGETYEADFPDKGIRFFSEKVSHHPTLIACHCEGRGWKFWGDSNIHSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVHGFIEDGMGKKVATLFGKWDDSMYYAIGDVNVKPKDFTSSDASLLWKRTKPPANLTRYNLTSFAITLNELLPGLKEKLPPTDSRLRPDQRHLENGEYEKANAEKQRLEKRQRMSRKMQENGWKPKWFQRDGANGTFRYVGGYWEAREQGKWDACPNIFGEFNGDSMAPLDAS 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1948 721 SMART PH_update 57 187 IPR001849 -
Sto11g1948 721 Pfam Pleckstrin homology domain 61 181 - -
Sto11g1948 721 Gene3D - 475 555 - -
Sto11g1948 721 MobiDBLite consensus disorder prediction 289 315 - -
Sto11g1948 721 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 361 549 IPR000648 GO:0008289
Sto11g1948 721 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 334 IPR000648 GO:0008289
Sto11g1948 721 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 548 712 IPR000648 GO:0008289
Sto11g1948 721 SUPERFAMILY Oxysterol-binding protein-like 384 712 IPR037239 -
Sto11g1948 721 ProSiteProfiles PH domain profile. 56 185 IPR001849 -
Sto11g1948 721 Gene3D - 638 700 - -
Sto11g1948 721 Coils Coil 639 668 - -
Sto11g1948 721 Pfam Oxysterol-binding protein 389 553 IPR000648 GO:0008289
Sto11g1948 721 Pfam Oxysterol-binding protein 548 696 IPR000648 GO:0008289
Sto11g1948 721 Gene3D - 52 187 IPR011993 -
Sto11g1948 721 MobiDBLite consensus disorder prediction 15 34 - -
Sto11g1948 721 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 548 712 - -
Sto11g1948 721 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 361 549 - -
Sto11g1948 721 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A 4 334 - -
Sto11g1948 721 MobiDBLite consensus disorder prediction 16 34 - -
Sto11g1948 721 SUPERFAMILY PH domain-like 54 182 - -
Sto11g1948 721 MobiDBLite consensus disorder prediction 642 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1948 Sto-Chr11 18218459 18227150 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1948 K20456 - gmx:100819924 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1948 11 18218459 18227150 Sto11g1948 11 18218459 18227150 ECH