Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1945 ATGTTGCTAATTTCTGAATCTTTTCCTCTGGGTCGAAAAGACTCGTCCATGGGCGAACGATCAGGCAATGATCTAGCACTATCCACGGGCCTCCAGTTAAAGCAAATTCCCTATCAGAAAAGTTGCCCAAGAGATGCCCTAAAGCTAGGAGTGTGTGCTAATTTGCTGAATGGACCAGTGGGTGCAGTGGTGGGTTCACCACTGAACCACCCTTGTTGTTCATTGCTTGAAGGACTTGTTGACCTTGAAGTGGCTCTTTGCCTTTGTACTGCCATTAAAGCTAACATTCTTGGCATTAACCTTAACATCCCCATTTCTCTTAGTTTGGTTCTCAATGCGTGTGAGAAGACCCCTCCTTCTGATTTCCAGTGTGCCTGA 378 0.4603 MLLISESFPLGRKDSSMGERSGNDLALSTGLQLKQIPYQKSCPRDALKLGVCANLLNGPVGAVVGSPLNHPCCSLLEGLVDLEVALCLCTAIKANILGINLNIPISLSLVLNACEKTPPSDFQCA 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1945 125 CDD HPS_like 41 124 IPR027923 -
Sto11g1945 125 PANTHER - 37 124 - -
Sto11g1945 125 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 37 124 - -
Sto11g1945 125 Gene3D - 35 125 IPR036312 -
Sto11g1945 125 SMART aai_6 42 124 IPR016140 -
Sto11g1945 125 Pfam Hydrophobic seed protein 42 125 IPR027923 -
Sto11g1945 125 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 44 124 IPR036312 -
Sto11g1945 125 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1945 Sto-Chr11 18181504 18185425 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1945 41 124 Acyl Lipid Metabolism Gene Families AT4G22490 36.905 5.34e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1945 - - var:108336118 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1945 11 18181504 18185425 Sto11g1945 11 18181504 18185425 ECH