Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1943 ATGATGAATTCAAAAGCCATATCCTTGTTCTTCATCTCCTTGATTTCCACTTTGAATGCTATGCCACCATTAATCCATGCTTGTGGTACTTGCAATCcaccccaccaccaccaccaccaccccaaaACCCCGAAGCCCAAGCCGCCCCATCACGGCGGCCACCCGCCCATCATAGTGCCGGCGCCACCCATCATAGTCCCAGCTCCGCCCGTCATAGTGCCAGCGCCACCCGTCATAGTCACACCTCCACCGGTGGCCCCTCCGGTGGTTATATACCCTCCGGTTGTTCCGGCACCGCCGGAGGTGAAGACGTGTCCCATAGATGCCTTGAAGCTAGGGCTGTGTTTGGATGTGCTGGGAGGACTTGTGCATGTGGGAATAGGGAATCCAGTTGAGAATATATGCTGCCCAGTGATACAAGGGTTGCTTGAGCTAGAAGCAGCTATTTGTCTTTGCACAGTTATAAGGCTTAAGCTTCTCAACCTCAATGtcttccttcctcttgctcttcaAGTCCTTATTACTTGTGGCCTCACTCCTCCTCCTGGTTTTGTTTGTCCACCTCTTACATAA 573 0.4729 MMNSKAISLFFISLISTLNAMPPLIHACGTCNPPHHHHHHPKTPKPKPPHHGGHPPIIVPAPPIIVPAPPVIVPAPPVIVTPPPVAPPVVIYPPVVPAPPEVKTCPIDALKLGLCLDVLGGLVHVGIGNPVENICCPVIQGLLELEAAICLCTVIRLKLLNLNVFLPLALQVLITCGLTPPPGFVCPPLT 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1943 190 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 107 188 IPR036312 -
Sto11g1943 190 SMART aai_6 105 186 IPR016140 -
Sto11g1943 190 Gene3D - 103 188 IPR036312 -
Sto11g1943 190 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 2 188 - -
Sto11g1943 190 MobiDBLite consensus disorder prediction 33 53 - -
Sto11g1943 190 MobiDBLite consensus disorder prediction 33 49 - -
Sto11g1943 190 PANTHER - 2 188 - -
Sto11g1943 190 Pfam Hydrophobic seed protein 104 187 IPR027923 -
Sto11g1943 190 CDD HPS_like 102 186 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1943 Sto-Chr11 18161199 18161771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1943 104 188 Acyl Lipid Metabolism Gene Families AT4G22490 34.118 1.14e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1943 - - sspl:121795033 160.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1943 11 18161199 18161771 Sto11g1943 11 18161199 18161771 ECH