Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1942 ATGGCTTCCAAATCTGCCCTTCTTCTTTGTCTCAACCTTCTCATCTTCTTCACAATAGTGGTTAGCTCCACCTACGTCCCATGCCCTCCATCCTCACCTAAACCTCCCAAACACCCtccttcaagtAAGCCTCCTTCTTGCCCTAAGGATACCCTTAAGTTTGGTGTGTGTGCCAATTTGTTGGGTTTGGTTAATGTTCAACTTGGGAAGCCACCAAAGACCCCTTGTTGTGCCCTTATTAAGGATCTTGCTGACCTTGAAGCTGCCGTTTGCCTTTGCACTGCCCTTAAAGCCAATGTCCTTGGGGTTAACCTTAACATTCCCATTAAGTTGAGCTTGCTTCTCAACTATTGCGGAAAGCAAGTCCCCCGCCAATTCCAGTGCGCCTAG 390 0.4692 MASKSALLLCLNLLIFFTIVVSSTYVPCPPSSPKPPKHPPSSKPPSCPKDTLKFGVCANLLGLVNVQLGKPPKTPCCALIKDLADLEAAVCLCTALKANVLGVNLNIPIKLSLLLNYCGKQVPRQFQCA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1942 129 Gene3D - 46 129 IPR036312 -
Sto11g1942 129 Pfam Hydrophobic seed protein 47 129 IPR027923 -
Sto11g1942 129 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 2 129 - -
Sto11g1942 129 PANTHER - 2 129 - -
Sto11g1942 129 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 50 128 IPR036312 -
Sto11g1942 129 CDD HPS_like 50 128 IPR027923 -
Sto11g1942 129 SMART aai_6 47 128 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1942 Sto-Chr11 18154328 18154747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1942 40 128 Acyl Lipid Metabolism Gene Families AT4G22490 32.584 4.64e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1942 - - gmx:100500229 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1942 11 18154328 18154747 Sto11g1942 11 18154328 18154747 ECH