Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1912 ATGCTTGCAATAATAGAAATCTGGGTTGTGATTGGAGATGTACCTTCTGTAGTTGGTGATTGTCTTGTTCTTGCTATCTCTCTTTCTGCTGCTCTGTTTGTTCATGTTTCACGTCAAGTGAACTTCGCTGCTAATTGGTTAGTCAAAATGGCCGTAAGGAGGATGTCTCCTGTTGGTTGGGTCGCCGCAACTAGTTTGATGTGTGTTTTAGGAGGAATGGCTAAGAGCTACTTCAAACAAGAGCACGATCTTGAGAAGAGAAGAGCAGAGGCTGCTAGGATTAGGGACAAGTACCCGGACAGGATCCCGGTGATTGTAGAGAAGGCAGAAAGAAGTGATATCCCAAGTATTGACAAGAAGAAGTATCTTGTGCCCGCTGACCTGACTGTTGGGCAGTTTGTCTATGTTATCCgcaaaaggattaaattaagcgCAGAAAAAGCAATCTTTATATTTGTGGACAATGTTCTTCCACCTACAGGTGCAATTATGTCTGCTATATATGAAGAGAAGAAGGATGAGGATGGATTCCTTTATGTTACATACAGTGGCGAGAATACCTTTGGGAATATAATTCCCCTCTTCCAGTAA 591 0.4129 MLAIIEIWVVIGDVPSVVGDCLVLAISLSAALFVHVSRQVNFAANWLVKMAVRRMSPVGWVAATSLMCVLGGMAKSYFKQEHDLEKRRAEAARIRDKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGNIIPLFQ 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1912 196 Pfam Autophagy protein Atg8 ubiquitin like 86 189 IPR004241 -
Sto11g1912 196 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 69 189 IPR004241 -
Sto11g1912 196 SUPERFAMILY Ubiquitin-like 75 189 IPR029071 -
Sto11g1912 196 CDD Ubl_ATG8 84 186 - -
Sto11g1912 196 Gene3D - 68 189 - -
Sto11g1912 196 PANTHER AUTOPHAGY-RELATED PROTEIN 69 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1912 Sto-Chr11 17860461 17864438 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1912 K08341 - rcu:8276940 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1912 11 17860461 17864438 Sto11g1912 11 17860461 17864438 ECH