Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1911 ATGGGAACCAGAACCAATTTCTACAAGAACCCATCTATATCCTACAAGAAAGACTTTAGTCTTTCCTCTGTTCTTCAGAACCTAAGAGCTTATAACATCGCTACCGGAAATGTTCCCGCCGATTCCGAGGAGAAAAGGCCCAACCAGAAGCGTCGTCGGGATCCGAGCCCGCGGCGAATCGTCGGAGCTAAATCTGAAGAGAATGATCTGCCTATGTCACATCGCGATTACATTGAAAAGAGAAGGAAGGAAGTTGGTTCGTCTGAGGCTTATGTAAAATTGAGCGAAGATGTTCTGGAAAACCCTAATTCTGCTGTGAGCTTGGTGGATTATACAAGTGATGAAAGCACTCATTCAGAATGTGAAGAAAAGCAGGATCTTCCAAACTCTGGTAATAAAAAAGAATCTGATGGAGTTAAAAGCAGAAATGAGCAGCGTTTTCCTGGTCCTGGAGAACCTGTTTGTCTTATGTGTGGCAGATATGGAGAATATATATGCAATGAGACAGATGATGACATATGTAGCATGGAGTGCAAAAGCGAACTCTTGGAAATTTTTAAACTGAGTGAGGGATCCTCCTATGTTCAACATCGGGATGGCTCTTCATCTGGACTCAGTTATGCCTTACCAGTGCCTGAGTTTGATGAGAACACCTGGGATTATAACCGACATCGCTGGTCAAAAAAGAGATCTAGTCTTTGTACTTATGAATGTTGGAGATGTCAAAAACCTGGACACCTAGCTGAAGACTGTATAGTAAATACTTCCAATCAGGCCACAGTTGCGGAGAGTAGATCTAGTTCCATTCCCAAGGATCTTCTTGGACTGTATAAAAGATGCCACCAAATTGGTAAAGATTTGTTGACTGCAAGTTGTAATGCATGCCGCAGCTCATCAGATTTGGCAACATGCCTTGATTGTAATACTGTCATTTGTGATGGAGCAGGACACTTGGATGAGCATATACAAACACACCCTTCTCATCAGCAATATTACTCACACAAGCTTAAACGTCTAGTAAAATGTTGCAAAACAACCTGCAAGGTGACTTCCATCAAGGATCTGCTGATTTGCCACTACTGCTTTGATAAAGCCTTTGAGAAATTCTACGACATGTATACTGCAACATGGAAAGGAGCTGGACTTTCAATTATATGGGGTTCTATATGCTGTGAAGACCACTTCAACTGGCACAGGATGAATTGTTTGAATGCAAATGTGGAAGAAAGTGCTTATATCATCAGGAAGAATGGCCATAAAGGCAAACGTAATCAGCTAAATGACTTCATTTTTTGA 1296 0.4167 MGTRTNFYKNPSISYKKDFSLSSVLQNLRAYNIATGNVPADSEEKRPNQKRRRDPSPRRIVGAKSEENDLPMSHRDYIEKRRKEVGSSEAYVKLSEDVLENPNSAVSLVDYTSDESTHSECEEKQDLPNSGNKKESDGVKSRNEQRFPGPGEPVCLMCGRYGEYICNETDDDICSMECKSELLEIFKLSEGSSYVQHRDGSSSGLSYALPVPEFDENTWDYNRHRWSKKRSSLCTYECWRCQKPGHLAEDCIVNTSNQATVAESRSSSIPKDLLGLYKRCHQIGKDLLTASCNACRSSSDLATCLDCNTVICDGAGHLDEHIQTHPSHQQYYSHKLKRLVKCCKTTCKVTSIKDLLICHYCFDKAFEKFYDMYTATWKGAGLSIIWGSICCEDHFNWHRMNCLNANVEESAYIIRKNGHKGKRNQLNDFIF 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1911 431 MobiDBLite consensus disorder prediction 111 146 - -
Sto11g1911 431 SMART c2hcfinal6 237 253 IPR001878 GO:0003676|GO:0008270
Sto11g1911 431 Gene3D - 234 281 - -
Sto11g1911 431 ProSiteProfiles Zinc finger CCHC-type profile. 238 251 IPR001878 GO:0003676|GO:0008270
Sto11g1911 431 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN ISOFORM 4 1 431 - -
Sto11g1911 431 SUPERFAMILY Retrovirus zinc finger-like domains 221 252 IPR036875 GO:0003676|GO:0008270
Sto11g1911 431 MobiDBLite consensus disorder prediction 115 142 - -
Sto11g1911 431 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 431 - -
Sto11g1911 431 MobiDBLite consensus disorder prediction 36 76 - -
Sto11g1911 431 Gene3D - 134 193 - -
Sto11g1911 431 MobiDBLite consensus disorder prediction 43 76 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1911 - - qsu:111988129 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1911 11 17850427 17856651 Sto11g1911 11 17850427 17856651 ECH