Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1875 ATGAGTGCTACTGTTGGTAATCAGTTGATCTCCGTCACTCCCGATGAGCTCAGGTTCCCATTTGAGCTCGAGAAGCAAGCATTTTGCGATCTTAAAGTTCTGAACAACACAGAGCACCACATTGCCTTTAAGGTCAAAACCACTTCGCCTAAGAAGTACTTTGTACGACCAAATACTGGTGTTATACAGCCTTGGGACTCATGTATCATCAGAGTAACCCTTCAAGCCCAACAAGAATATCCTCCAGACATGCAATGCAAAGATAAATTTCTGTTGCAGAGTACAATAGTGACTCAAATTACTGATGTTGATGAGCTTCCACCTGATACTTTTAATAAGGATAGTGGGAACCAAATAGAGGAATGCAAACTAAGAGTTGTGTATGTCACTAATACTTCAGCCTCAGAAGATGAAGCCTCCAAGGGCACCGCCCAAAAATCTGATGCTAATTCTGTTTTACAGCGtttgaaggaagagagagatgCTGCTTCAAGACAAACAGTGCAACTGAAACAGGAACTGGAAATGCTGAAAAAGCGAAGAAACCGAAGCAGTCCCGGCGTTTCCTTCAAGTTCGCCCTTATTGTATGCCTCATTGGAATTCTGGTTGGCTTGTTCTTGAAACTCACTTGGGGGTCATCATCCTCATCCACCGGATCTTCACCGCCTATTGAGGTTGCGCCGCCCATCGAGTCTTCCCCGCCGACCGAGTTTCCACCACCCACTCAATGA 732 0.4399 MSATVGNQLISVTPDELRFPFELEKQAFCDLKVLNNTEHHIAFKVKTTSPKKYFVRPNTGVIQPWDSCIIRVTLQAQQEYPPDMQCKDKFLLQSTIVTQITDVDELPPDTFNKDSGNQIEECKLRVVYVTNTSASEDEASKGTAQKSDANSVLQRLKEERDAASRQTVQLKQELEMLKKRRNRSSPGVSFKFALIVCLIGILVGLFLKLTWGSSSSSTGSSPPIEVAPPIESSPPTEFPPPTQ 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1875 243 MobiDBLite consensus disorder prediction 227 243 - -
Sto11g1875 243 Coils Coil 146 180 - -
Sto11g1875 243 MobiDBLite consensus disorder prediction 214 243 - -
Sto11g1875 243 Pfam MSP (Major sperm protein) domain 10 105 IPR000535 -
Sto11g1875 243 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 6 212 IPR016763 GO:0005789
Sto11g1875 243 SUPERFAMILY PapD-like 6 135 IPR008962 -
Sto11g1875 243 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 6 212 - -
Sto11g1875 243 PIRSF VAMP_assoc_prot 130 209 IPR016763 GO:0005789
Sto11g1875 243 PIRSF VAMP_assoc_prot 2 154 IPR016763 GO:0005789
Sto11g1875 243 Gene3D Immunoglobulins 3 132 IPR013783 -
Sto11g1875 243 ProSiteProfiles Major sperm protein (MSP) domain profile. 9 129 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1875 Sto-Chr11 17497482 17500236 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1875 - - aprc:113869624 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1875 11 17497482 17500236 Sto11g1875 11 17497482 17500236 ECH