Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1851 ATGCTGAAACTGAGTTTCCTATTGATTTTCCTTGTGCTTCAAGCCACAAACGCCCTAGACGATCACAATCTCATCCATTTGTCCTGCCGGAACGCCTCGAACGACGACCCGAACATCGCCTACAATTTCTGCGTCTCCGCCCTCGAGACCACCTGTTCGAGCCAGCAGAGGCAACCCATCGCGAGCCTCGAGGAACTCGCGGCCGTTTCAATCGAAATAACCAGATCCAACGCGACCACCATGGTCTCCAACATTTCCAACAtcttgaaggagaagaagaagaagaagaagttgagTGAATATACGAAGGCTTGCCTGAAAGATTGCTTCGATCTTTACTCGAATTCGGTATCGGAATTGGAGGATGCGATGGGCGCTTATAGGTCGAGGGATTTGGATACGGCAAATGTAAAGATAAGTGCTGCGTTGGATGCTTGTGTTACGTGTGAGGATCAGTTTGGTGATAGAGGGGAGAAATCCCCTTTAACGGAGGATAATGGATATTACTCTATGCTTAATTCTATGTCTTTGGTTTTCATTGAGATGAGTCGTGCAATTCCGGTGAGCCATTCTGCGAATCTTCAAGGGCTAGCTCTGATCGCCATGGAGCTAGCACTAGAGAACGCCACCACCACGGTTTCCACCATAGAGAAGCTCTTGAACGGCACGAGTtccgatgaagaagaagatggtaaTGATGATGGGTGGTTGAGGGAGTGCTTGGAGGTGTACTCCGATGCGGCGTGGAGCATAGTGAATTCCGTAGGCGCGTTCTTGTCGGAGGATTACGAGATGACGAGGGTGTTGATGAGTGGGGTGATGGAGGCGGCGTCCACGTGTCAGGAGGGAGGGTTTGGAGAGGAGTCGTCGTCGCCGTTGACGAAGCAGAATTATGATCTCTTCCAGCTTTGTGGGATTGCGCTGTGCATCGTCCACGCGTCTACTCCGGCGATTCGTCTTAACTCGCCGTGA 972 0.4835 MLKLSFLLIFLVLQATNALDDHNLIHLSCRNASNDDPNIAYNFCVSALETTCSSQQRQPIASLEELAAVSIEITRSNATTMVSNISNILKEKKKKKKLSEYTKACLKDCFDLYSNSVSELEDAMGAYRSRDLDTANVKISAALDACVTCEDQFGDRGEKSPLTEDNGYYSMLNSMSLVFIEMSRAIPVSHSANLQGLALIAMELALENATTTVSTIEKLLNGTSSDEEEDGNDDGWLRECLEVYSDAAWSIVNSVGAFLSEDYEMTRVLMSGVMEAASTCQEGGFGEESSSPLTKQNYDLFQLCGIALCIVHASTPAIRLNSP 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1851 323 CDD PMEI-Pla_a_1_like 29 182 IPR034088 -
Sto11g1851 323 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 187 312 IPR035513 -
Sto11g1851 323 CDD PMEI-Pla_a_1_like 192 313 IPR034088 -
Sto11g1851 323 TIGRFAM PME_inhib: pectinesterase inhibitor domain 187 312 IPR006501 GO:0004857
Sto11g1851 323 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 182 IPR006501 GO:0004857
Sto11g1851 323 PANTHER PECTINESTERASE INHIBITOR-LIKE 184 316 - -
Sto11g1851 323 PANTHER PECTINESTERASE INHIBITOR-LIKE 22 170 - -
Sto11g1851 323 PANTHER INVERTASE INHIBITOR-RELATED 22 170 - -
Sto11g1851 323 PANTHER INVERTASE INHIBITOR-RELATED 184 316 - -
Sto11g1851 323 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 22 182 IPR035513 -
Sto11g1851 323 Gene3D Invertase/pectin methylesterase inhibitor family protein 183 313 IPR035513 -
Sto11g1851 323 Gene3D Invertase/pectin methylesterase inhibitor family protein 20 182 IPR035513 -
Sto11g1851 323 Pfam Plant invertase/pectin methylesterase inhibitor 23 177 IPR006501 GO:0004857
Sto11g1851 323 Pfam Plant invertase/pectin methylesterase inhibitor 187 310 IPR006501 GO:0004857
Sto11g1851 323 SMART PMEI_2 184 310 IPR006501 GO:0004857
Sto11g1851 323 SMART PMEI_2 20 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1851 Sto-Chr11 17232942 17237806 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1851 - - gmx:100305474 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1851 11 17232942 17237806 Sto11g1851 11 17232942 17237806 ECH