Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1580 ATGAATACTCCTTCtcctcccttcttcctccttctctttctctttctcttctctttctctcttctactCTTCCCCACCAATGCCACCACCGCACGCTTCAAACAAGCCCCTAAATTCTACAACTCCCCCTCCTGCCCCACCATCCGCCAccactcctcctcctcctccgccgccgccgACATCTGCTCCACCTCCGCCGTCCACGTGGCCATGACCCTCGACCTCCCCTACCTCCGCGGCTCCCTGGCCGCCATCTTCTCCATCCTCCAACACTCCTCCTGCCCCGACAACATCGTCTTCCACTTCATCACCGCCGCCTCCAAACCCTCCTCCTcccttaccctaaaccacaCCCTCTCCAATTCCTTCCCCTACCTCCATTTCCACATTTACCCCTTCCAAGACGTCGTCGTTTCGGGCCTCATCTCTTCCTCCATACGCTCCGCATTGGACTCCCCTCTCAACTACGCTCGTAACTACCTCTCCAATCTCCTCCCGCCTTGTGTCCCCCGCGTCGTCTACCTCGACTCCGACTTGATCCTCGTCGACGACATCGCCAAGCTCGCCGCCACGCCGCTCGGCTCCGATTCCGTCCTCGCCGCGCCGGAATACTGCAACGCTAACTTCACGAACTACTTCACGCCGTCCTTCTGGTCCAACCCCTCCCTCTCCGGAACCTTCGCGGCTCGCAGGCCTTGCTATTTCAACACCGGCGTCATGGTCATCGATTTAGAGCGGTGGCGGGAAGGAGACTACACGACGAAGATCGAAGAGTGGATGGAGTTGCAGAAGAGAATGCGGATCTACGAGCTGGGGTCGTTGCCGCCGTTCTTGCTGGTTTTCGCCGGGAATATTGCTCCGGTGGATCACAGGTGGAACCAGCACGGGCTTGGCGGCGATAACTTCCGTGGGCTTTGCAGGGAGCTGCATCCGGGCCCAGCGAGCCTTCTCCATTGGAGTGGGAAGGGTAAGCCATGGGCCCGATTGGATGCGCATAGGCCTTGCCCATTAGATGCCTTgcATCCCAAACACATCCCTATTTTGCATCCCATCCcatccatcatcatcatgaaaCCAACCAAGTGGTTCTCAAACAACAATAATAAGCCCATCTCCACCAGGCCCACCACTCTGTCCCTCTCCAAATCAAATAATTGCACATCAAAATCCCGAGAGCAAGAGCTGCGTGAGGTATTCCGTTACTTCGACGGCAACGGCGACGGCAAAATCTCCGCCTCCGAGCTCCGATCGTACTTCGGCTCGATCGGGGAGTACCTGTCGCAGGAGGAGGCGGAGGGCGTGATATCGGAGCTGGATACGGACGGCGACAATCTACTGGAGTTCTCGGATTTCATGAGGATGATgaagaaagatgaagaaaacGATGGAGAAGATCTGAAGAAGGCGTTTGAGATGTTCGAGTGGGAGAAAGGGTCGGGATGTATCACGCCGAAAGGCCTTCAGAGGATGCTGCAACGTCTCGGAGATAACAAGTCGCACCAAGAGTGCGTCGCTATGATTCACGCCTTTGATGTTGATCGGAACGGCGTCCTTGATTTCAATGAGTTTCAACAAATGATGACCGCCTGA 1590 0.5164 MNTPSPPFFLLLFLFLFSFSLLLFPTNATTARFKQAPKFYNSPSCPTIRHHSSSSSAAADICSTSAVHVAMTLDLPYLRGSLAAIFSILQHSSCPDNIVFHFITAASKPSSSLTLNHTLSNSFPYLHFHIYPFQDVVVSGLISSSIRSALDSPLNYARNYLSNLLPPCVPRVVYLDSDLILVDDIAKLAATPLGSDSVLAAPEYCNANFTNYFTPSFWSNPSLSGTFAARRPCYFNTGVMVIDLERWREGDYTTKIEEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNFRGLCRELHPGPASLLHWSGKGKPWARLDAHRPCPLDALHPKHIPILHPIPSIIIMKPTKWFSNNNNKPISTRPTTLSLSKSNNCTSKSREQELREVFRYFDGNGDGKISASELRSYFGSIGEYLSQEEAEGVISELDTDGDNLLEFSDFMRMMKKDEENDGEDLKKAFEMFEWEKGSGCITPKGLQRMLQRLGDNKSHQECVAMIHAFDVDRNGVLDFNEFQQMMTA 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1580 529 Gene3D - 460 529 - -
Sto11g1580 529 SMART efh_1 394 422 IPR002048 GO:0005509
Sto11g1580 529 SMART efh_1 502 529 IPR002048 GO:0005509
Sto11g1580 529 SMART efh_1 430 458 IPR002048 GO:0005509
Sto11g1580 529 CDD EFh 394 456 IPR002048 GO:0005509
Sto11g1580 529 ProSiteProfiles EF-hand calcium-binding domain profile. 390 425 IPR002048 GO:0005509
Sto11g1580 529 SUPERFAMILY EF-hand 387 528 IPR011992 -
Sto11g1580 529 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 10 341 - -
Sto11g1580 529 ProSitePatterns EF-hand calcium-binding domain. 511 523 IPR018247 -
Sto11g1580 529 ProSiteProfiles EF-hand calcium-binding domain profile. 498 529 IPR002048 GO:0005509
Sto11g1580 529 Pfam Glycosyl transferase family 8 68 328 IPR002495 GO:0016757
Sto11g1580 529 Gene3D - 379 459 - -
Sto11g1580 529 CDD EFh 465 528 IPR002048 GO:0005509
Sto11g1580 529 ProSiteProfiles EF-hand calcium-binding domain profile. 426 461 IPR002048 GO:0005509
Sto11g1580 529 SUPERFAMILY Nucleotide-diphospho-sugar transferases 67 344 IPR029044 -
Sto11g1580 529 ProSitePatterns EF-hand calcium-binding domain. 439 451 IPR018247 -
Sto11g1580 529 Pfam EF-hand domain pair 392 456 IPR002048 GO:0005509
Sto11g1580 529 Pfam EF-hand domain pair 466 528 IPR002048 GO:0005509
Sto11g1580 529 PANTHER HEXOSYLTRANSFERASE 10 341 - -
Sto11g1580 529 ProSitePatterns EF-hand calcium-binding domain. 403 415 IPR018247 -
Sto11g1580 529 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 68 334 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1580 Sto-Chr11 14901233 14910014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1580 13 340 Glycosyltransferase AT3G50760 68.882 5.80e-165 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1580 K20893 - gmx:100783054 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1580 11 14901233 14910014 Sto11g1580 11 14901233 14910014 ECH