Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1571 ATGATTAAACTATTCAAAGTAAAGGAAAAGCAGAGAGAACTTGCAGAAAATGCAAGTGGTGGAGCACCGGTTAAGAAACAAACTGCTGGGGAGTTGCGTCTGCACAAAGTCAACTTTAAACCACCTCTGGACTTCTTGTTGGACATGACAAGAGATATTAGTGAGCTGAATCTACCAAAATCTTGTACTATGCAATTCCCTAATGGCAAAGATGATCTGATGAATTTTGAAGTTTCGATCCGGCCTGATGAAGGATATTATTTAGGTGGCACATTTTTGTTTTCCTTCCAAGTTTCTCCCATCTATCCACATGAAGCACCAAAAGTTAAGTGCAAGACAAAGGTCTACCATCCAAATATTGACTTGGAAGGAAATGTTTGCCTCAACATCTTACGAGAAGATTGGAAACCAGTTCTCAATATAAACACAGTCATTTATGGATTGTATCATCTTTTCACGGAACCCAATTATGAGGACCCTCTCAATCATGATGCGGCGGCAGTTTTGAGAGAGAATCCAAAGATGTTTGAGTCTAATGTGAGGAGGGCTATGGCTGGTGGGTATGTGGGGCAAACCTTTTTCCCACGTTGTATGTAA 597 0.4054 MIKLFKVKEKQRELAENASGGAPVKKQTAGELRLHKVNFKPPLDFLLDMTRDISELNLPKSCTMQFPNGKDDLMNFEVSIRPDEGYYLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAAVLRENPKMFESNVRRAMAGGYVGQTFFPRCM 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1571 198 CDD UBCc 70 182 IPR000608 -
Sto11g1571 198 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 116 131 IPR023313 -
Sto11g1571 198 Pfam Ubiquitin-conjugating enzyme 51 183 IPR000608 -
Sto11g1571 198 SUPERFAMILY UBC-like 48 196 IPR016135 -
Sto11g1571 198 Gene3D Ubiquitin Conjugating Enzyme 46 198 IPR016135 -
Sto11g1571 198 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 26 188 - -
Sto11g1571 198 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 41 189 IPR000608 -
Sto11g1571 198 PANTHER - 26 188 - -
Sto11g1571 198 SMART ubc_7 44 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1571 Sto-Chr11 14825309 14828011 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1571 K10579 - gmx:100783122 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1571 11 14825309 14828011 Sto11g1571 11 14825309 14828011 ECH