Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1539 ATGGCGGGCTTAATGAGCTTCTTCTTCACTTGTTTCACCGTTTTCTTCCTACTTGTTGGCTTTTCCTCTTTTCCAGCTGAAGCAGCCATTAAGAGATACCAATTTGATaTTCAAATGAAGAATGTGAGTAGGCTCTGCCATGCAAAACCCATTGTAACAGTTAATGGGAGATTCCCAGGACCTACGGTTTATGTCAGAGAAGGAGACAGAGTGCTAATCAATGTCACAAACCATGTGCAATATAACTTGTCAATTCACTGGCACGGACTGAAACAATATCGGAACGGTTGGGCCGATGGACCGGCCTACATTACACAGTGTCCTATAAAAAGTGGGAGAAGCTACACCTATGACTTCAACGTCACAGGGCAAAGAGGGACATTATGGTGGCATGCACATATTCTTTGGTTGAGAGCCACTGTGTATGGTGCCATTGTCATTATGCCCAAGCCTGGAACTCCATTTCCTTTTCCACAGCCAGCCAGAGAATTTGAAATTCTATTAGGTGAATGGTGGAACAATGACGTGGAATTGGTGGAAAAGCAAGGAAGCAGAATGGGGTTGCCACCAAATATGTCTGATGCACATACGATCAATGGGAAGCCTGGGCCTCTCTTTCCTTGCTCTGAGAAacATACATATGCAATGGAGGTTGAGGAGGGGAAGACATACCTGCTCAGAATCATCAACGCGGCTCTGAACGACGAGCTTTTCTTCGGCATCGCAGGTCACAACCTAACCGTAGTAGAAGTCGACGCTGTCTACACCAAACCCTTCACCACACAAGCCATCCTAATAGCACCTGGTCAAACCACCAACGTCCTCGTCCAAGCCAACCAACCACCAGCCCGATACTTCATCTCCACTCGACCCTTCATGGACGCACCAATCCCCGTCGACAACAAAACCGCCACCGCCATTTTCCAATACAAAGGAATTCCCAATACTGCCCTCCCTCTCCTCCCTCATTTACCTTCCCCCAACGACTCAACCTTCGCTCTCAATTACAACAGAAAACTCCGAAGCTTGAATTCCCCTCTCTACCCGGCCAATGTCCCTCTCCATGTGGACCGAAACCTCTTCTACACCATCGGCTTGGGGAAGAACACGTGCCCCACGTGCGTGAATGGGACGAGGATTCTTGCCTCCTTGAACAACGTGTCGTTCGTGATGCCGGAGATCGCGCTTCTGCAAGCTCATTATTATGGTGTGAAGGGGGTTTTTAGGAGTGATTTTCCGGATCGGCCTACGACGTCGTTTAATTACACGGGCGCGCCGTTGACGGCGAATCTGGGCACTTCGACGGGGACGAGGGTTAGTAGGATTGGGTTTAATTCGACGGTGGAGTTGGTTTTGCAGGACACGAATTTGCTGACGGTTGAGTCGCATCCGTTTCATCTTCATGGGTATAACTTCTTTGTGGTTGGGAGTGGGATTGGTAATTTTGATGCGGCGAGAGATGGGGCTAAGTATAACTTGGTGGATCCTATCGAGAGGAATACCGTCGGGGTTCCCACCGGTGGATGGACGGCGATTCGTTTCCGGGCCGATAATCCAGGTGTTTGGTTCATGCATTGTCATTTAGAGCTGCACACTGGTTGGGGTTTGAAAACAGCATTCGTTGTAGAAGATGGACCTACGCCAGATCAATCTGTTTTGCCTCCTCCCAAGGACCTTCCTCCATGCTGA 1689 0.4908 MAGLMSFFFTCFTVFFLLVGFSSFPAEAAIKRYQFDIQMKNVSRLCHAKPIVTVNGRFPGPTVYVREGDRVLINVTNHVQYNLSIHWHGLKQYRNGWADGPAYITQCPIKSGRSYTYDFNVTGQRGTLWWHAHILWLRATVYGAIVIMPKPGTPFPFPQPAREFEILLGEWWNNDVELVEKQGSRMGLPPNMSDAHTINGKPGPLFPCSEKHTYAMEVEEGKTYLLRIINAALNDELFFGIAGHNLTVVEVDAVYTKPFTTQAILIAPGQTTNVLVQANQPPARYFISTRPFMDAPIPVDNKTATAIFQYKGIPNTALPLLPHLPSPNDSTFALNYNRKLRSLNSPLYPANVPLHVDRNLFYTIGLGKNTCPTCVNGTRILASLNNVSFVMPEIALLQAHYYGVKGVFRSDFPDRPTTSFNYTGAPLTANLGTSTGTRVSRIGFNSTVELVLQDTNLLTVESHPFHLHGYNFFVVGSGIGNFDAARDGAKYNLVDPIERNTVGVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFVVEDGPTPDQSVLPPPKDLPPC 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1539 562 CDD CuRO_2_LCC_plant 166 310 IPR034285 -
Sto11g1539 562 Gene3D - 369 562 IPR008972 -
Sto11g1539 562 SUPERFAMILY Cupredoxins 353 562 IPR008972 -
Sto11g1539 562 SUPERFAMILY Cupredoxins 29 174 IPR008972 -
Sto11g1539 562 TIGRFAM laccase: laccase 28 562 IPR017761 GO:0046274|GO:0048046|GO:0052716
Sto11g1539 562 Pfam Multicopper oxidase 415 544 IPR011706 GO:0005507|GO:0016491
Sto11g1539 562 ProSitePatterns Multicopper oxidases signature 1. 520 540 IPR033138 -
Sto11g1539 562 Pfam Multicopper oxidase 37 150 IPR011707 GO:0005507
Sto11g1539 562 PANTHER LACCASE 12 562 - -
Sto11g1539 562 Pfam Multicopper oxidase 166 312 IPR001117 -
Sto11g1539 562 Gene3D - 161 345 IPR008972 -
Sto11g1539 562 CDD CuRO_3_LCC_plant 407 545 IPR034289 GO:0005507
Sto11g1539 562 PANTHER MULTI-COPPER OXIDASE 12 562 IPR045087 -
Sto11g1539 562 ProSitePatterns Multicopper oxidases signature 2. 525 536 IPR002355 GO:0005507
Sto11g1539 562 CDD CuRO_1_LCC_plant 33 149 IPR034288 GO:0005507
Sto11g1539 562 Gene3D - 21 149 IPR008972 -
Sto11g1539 562 SUPERFAMILY Cupredoxins 157 327 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1539 Sto-Chr11 14564597 14569355 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1539 K05909 - qsu:111998820 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1539 11 14564597 14569355 Sto11g1539 11 14564597 14569355 ECH