Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1531 ATGGACATAGAGAAAGTGTTCCACATGACTGGAGGAATTGGCAACACAAGCTATGCCAAAAATTCCTCACTCCAGAAGGAGGCATCTGATAAGGTGAAGCACATAATCATAGAGACAGTACAGAAGCTTTTTGTTGAAACCACTCCAAAGAGCATTGGAATTGCAGATTTGGGGTGTTCTTCTGGACCTAACACCCTATCAATCATCAAAGACATATTTGAAGCCATCCAAGGGATCCCTAATTCACCATCAcctaataatgataataataataataataatattagttcTTCTGAGTTTCGTGTGTACCTTAACGATCTTCCAACCAATGACTTCAACTCAATCTTCAAGAACTTGCCAGAATTCCACAGTTTGCTTAGGCAACAAGGCAACAATAATgtgCCTCGAGCAGTTTATGATGAGGAGGGAAGGTCATTGAACAAGGGAAGTATATACATATCAGAATCAAGTCCTGAAGTGGTGGTTGAAGCCTACTTTAAGCAATTCCAAGAGGATTTTTCCTTGTTTCTCAGGTCAAGGTCCGAAGAAGTGGTATTGGGTGGAAGAATGGTGCTCATTTTTCTAGGAAGGGAAGGCCCCTCACATGTTGACAGGGGAAACTCTTTCTTCTGGAAAATTCTTTACCGTTCCTTTGCCACTTTGGTCTCCAAGGGAGAAGTAGAAGAGGAGAAAGTTGATTCATATGATGTGCATTTCTATGCTGCATCAAGGGAAGAGATAGAAGATGAAGTGAGGAAAGAGGGGTCGTTTGAGTTGGAAAGAATGGAAATGTCGGAAATAAGAGAAAGGAATTATGAGGAATCATCAGGGAAGGAGAGTTATGGGATGGTGGTTGCAAAGACCGTTTAG 870 0.4023 MDIEKVFHMTGGIGNTSYAKNSSLQKEASDKVKHIIIETVQKLFVETTPKSIGIADLGCSSGPNTLSIIKDIFEAIQGIPNSPSPNNDNNNNNNISSSEFRVYLNDLPTNDFNSIFKNLPEFHSLLRQQGNNNVPRAVYDEEGRSLNKGSIYISESSPEVVVEAYFKQFQEDFSLFLRSRSEEVVLGGRMVLIFLGREGPSHVDRGNSFFWKILYRSFATLVSKGEVEEEKVDSYDVHFYAASREEIEDEVRKEGSFELERMEMSEIRERNYEESSGKESYGMVVAKTV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1531 289 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 2 129 IPR005299 GO:0008168
Sto11g1531 289 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 133 289 IPR005299 GO:0008168
Sto11g1531 289 Gene3D Vaccinia Virus protein VP39 21 124 IPR029063 -
Sto11g1531 289 ProSitePatterns EF-hand calcium-binding domain. 88 100 IPR018247 -
Sto11g1531 289 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 279 IPR029063 -
Sto11g1531 289 Gene3D - 136 278 IPR042086 -
Sto11g1531 289 PANTHER OS01G0701700 PROTEIN 2 129 - -
Sto11g1531 289 PANTHER OS01G0701700 PROTEIN 133 289 - -
Sto11g1531 289 Gene3D Vaccinia Virus protein VP39 165 268 IPR029063 -
Sto11g1531 289 Gene3D - 6 20 IPR042086 -
Sto11g1531 289 Pfam SAM dependent carboxyl methyltransferase 133 283 IPR005299 GO:0008168
Sto11g1531 289 Pfam SAM dependent carboxyl methyltransferase 39 131 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1531 Sto-Chr11 14500264 14501825 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1531 - - gmx:100170649 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1531 11 14500264 14501825 Sto11g1531 11 14500264 14501825 ECH