Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1524 ATGGCATCATCATCTCTAAATAGTCTTGTTACGAGTAAGGCCCTTTCTACGGCTACTACCTTAGCTACCGTAGCTGCATCCTTGATGTTTCTACGAACCACAATCAACGATCTAATTCCCCACCAACTCCAAACTTTGATTCTCTCAAAGCTAAAAGATTTATTCTCTAAAGCACAAATAAAGGGTACTATAGTGATGCTTGAGATCAATCAACTCTGGGACGATCATCAGAGCTACAACCAACTCTTCAAAGCCGCAAAAGCCTACCTTCCAACCCGAATCACACGCACTTACAAATCCCTCAAAGTAGGTGTACCAGACGTGGACGACAAAATAGCATTCGCCCTCAACTCCAAGCAAGAAGTGGTGGATGAGTTTGAAGACATGAAGCTCTATTGGAAGCTCGTAGACAATCCCCAAAATGTCCCTACAGATGCATTTGAGAAGAGCACCTTCTTCCTGAGCTTCAACGCCAAACACAGAGACAGAGTAATAAACGAGTATTTACCACACGTGTTAAGCGTGTACGAGGCCATTAAAGCAAAGCAGAGGAATGTAAATCTGCATTACATAAGCTCCTATTCCCAGTGGTCACGGAAGGAATTGAAGCATCCTGCAACCTTCGAAACGCTTGCGTTTGAGCCAGAGCTGAAGCAAAGGATTCTTGAGGATATAGAGAGATTCTTGAGGAGGAAGGAGTTGTACAAGAAAGTGGGGAAGCCATGGAAGAGAGGGTATTTGTTGTATGGGCCTCCAGGAACGGGGAAATCTAGTCTCGTTGTAGCCATGGCTAACTACTTAAAATTTGATGTGTATAATTTGGAGTTGGCTCGGCTTTCCTGTGATTCAGATCTCATGAAAGCAATGACTGATATGTCTAACCGTTCCATCGTTGTCATTGAAGATATTGATTGCAACAAAGAGGTTCATACTCGAGATTCAGACTCAGGCTATGTTTCTAAGCCCAACCAGGGAATGAGGAAGTTCACGCTGTCGAGTCTATTAAATTACATGGATGGTTTATGGTCAAGTAGTGGAGAGGAGCGAATTATAGTATTCACTACCAATCACGTTGAGAAAATAGACCCAGCATTACTGCGACCAGGTCGAATGGACATGCACATAAACTTAACCTTCTCTAAAGGCAATGCATTTAGAACCTTAGCCTCCAATTATTTAGACATTCATGGAGATCACCCACTCTTCCAACAGATTGATGTGTTATTGGAGAAAGTACAAGTCACACCTGCGGTAATAGCTGAACAATTGTTGAGGTACGAGGATTCTGACGTTGCCTTGAAAGAATTTATCCGATTTCTTCAACACAAAGATATAATCATCGCTGAAGCAGATAATACCACTCAAGTGTAG 1371 0.4252 MASSSLNSLVTSKALSTATTLATVAASLMFLRTTINDLIPHQLQTLILSKLKDLFSKAQIKGTIVMLEINQLWDDHQSYNQLFKAAKAYLPTRITRTYKSLKVGVPDVDDKIAFALNSKQEVVDEFEDMKLYWKLVDNPQNVPTDAFEKSTFFLSFNAKHRDRVINEYLPHVLSVYEAIKAKQRNVNLHYISSYSQWSRKELKHPATFETLAFEPELKQRILEDIERFLRRKELYKKVGKPWKRGYLLYGPPGTGKSSLVVAMANYLKFDVYNLELARLSCDSDLMKAMTDMSNRSIVVIEDIDCNKEVHTRDSDSGYVSKPNQGMRKFTLSSLLNYMDGLWSSSGEERIIVFTTNHVEKIDPALLRPGRMDMHINLTFSKGNAFRTLASNYLDIHGDHPLFQQIDVLLEKVQVTPAVIAEQLLRYEDSDVALKEFIRFLQHKDIIIAEADNTTQV 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1524 456 SMART AAA_5 242 381 IPR003593 -
Sto11g1524 456 Pfam Domain associated at C-terminal with AAA 39 136 IPR025753 -
Sto11g1524 456 Gene3D - 377 447 - -
Sto11g1524 456 Gene3D - 195 376 IPR027417 -
Sto11g1524 456 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 14 447 - -
Sto11g1524 456 Pfam ATPase family associated with various cellular activities (AAA) 247 377 IPR003959 GO:0005524|GO:0016887
Sto11g1524 456 ProSitePatterns AAA-protein family signature. 349 367 IPR003960 GO:0005524|GO:0016887
Sto11g1524 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 430 IPR027417 -
Sto11g1524 456 CDD AAA 231 377 - -
Sto11g1524 456 PANTHER BCS1 AAA-TYPE ATPASE 14 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1524 Sto-Chr11 14435733 14437203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1524 207 377 Miscellaneous Gene Families AT3G47060 34.409 1.71e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1524 - K08900 gmx:100789094 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1524 11 14435733 14437203 Sto11g1524 11 14435733 14437203 ECH