Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1466 ATGGCTTTGAATATATCAGCTGGAGACCACGTTCTTGACCTATGTGCTGCTCctgGTGCTAAACTTTGTATGATATTAGACCTTCTTGGTGATTCGGGATCTGTAACTGGAGTAGATGTTGCAAGACATCGTTTAGCAGCATGTAGAACAATGCTGCAGAAGTATTCTCTGGGTGATCGATGTCGGCTTTTTGTTGCTGATGGAGTAACATTTTCACTTATTCCTGCAGGAAGCTGTTCAGACAGTAAACCAtGTGAATCTGACTTGACCGAGAAAGTGGATATATTCAAGGAGTGGACATCTAGAAGAACatggaaggaaaggaaaaaggcaAGAAAAAGTGGACCTCCACAGTTGGTCTCCAGGTCTCAGCCTCCTGAACTCATATATTATGGGCGGCATTCTGGAGTTGTTGGACTTACTAAAGAAGATTTATATAAGATTGTATCTGATAGAGAGATTATGAGCTCCGGCTACAACAAGGTCCTTGTGGATGCAGAGTGCACACATGATGGTTCAGTCAaacatattcaaaagtttgaacATTGGGGCTGGAAAACTCTACAACGCCGTGTCCTAGATGCAGAAAGGACTGATAACTTGCATGTTCTTCAGTTGAGTCTTCTGACTAATGGTTTCAGACTACTAAAAGTTGGAGGGTCACTTGTCTACAGCACTTGCAGCTTAACTGTTGCTCAGAATGAAGACGTGATAGAGCAATTCCTGAAGGAAAATGCATCTGCCGAATTGCAGGAAATAGATGCTGCCAGAAGTTGGCCATGCAAGGGTGGCCGGGTAGAAAAAACATGGCGATTTGACCCATTAACATCACAAACTAGTGGACTCTTCGTGGCGAAGTTCACAAAATTGGCCATTTGA 879 0.413 MALNISAGDHVLDLCAAPGAKLCMILDLLGDSGSVTGVDVARHRLAACRTMLQKYSLGDRCRLFVADGVTFSLIPAGSCSDSKPCESDLTEKVDIFKEWTSRRTWKERKKARKSGPPQLVSRSQPPELIYYGRHSGVVGLTKEDLYKIVSDREIMSSGYNKVLVDAECTHDGSVKHIQKFEHWGWKTLQRRVLDAERTDNLHVLQLSLLTNGFRLLKVGGSLVYSTCSLTVAQNEDVIEQFLKENASAELQEIDAARSWPCKGGRVEKTWRFDPLTSQTSGLFVAKFTKLAI 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1466 292 CDD AdoMet_MTases 11 79 - -
Sto11g1466 292 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 1 290 - -
Sto11g1466 292 Gene3D Vaccinia Virus protein VP39 1 291 IPR029063 -
Sto11g1466 292 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 1 290 IPR001678 GO:0008168
Sto11g1466 292 PRINTS RNA (C5-cytosine) methyltransferase subfamily 9 signature 37 54 IPR023269 -
Sto11g1466 292 PRINTS RNA (C5-cytosine) methyltransferase subfamily 9 signature 180 199 IPR023269 -
Sto11g1466 292 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 289 IPR029063 -
Sto11g1466 292 Pfam 16S rRNA methyltransferase RsmB/F 1 72 IPR001678 GO:0008168
Sto11g1466 292 Pfam 16S rRNA methyltransferase RsmB/F 157 287 IPR001678 GO:0008168
Sto11g1466 292 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 1 290 IPR023267 GO:0001510
Sto11g1466 292 PRINTS RNA (C5-cytosine) methyltransferase signature 26 36 IPR023267 GO:0001510
Sto11g1466 292 PRINTS RNA (C5-cytosine) methyltransferase signature 160 172 IPR023267 GO:0001510
Sto11g1466 292 PRINTS RNA (C5-cytosine) methyltransferase signature 219 235 IPR023267 GO:0001510
Sto11g1466 292 PRINTS RNA (C5-cytosine) methyltransferase signature 272 289 IPR023267 GO:0001510
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1466 Sto-Chr11 13906206 13908910 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1466 - - gmx:100788419 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1466 11 13906206 13908910 Sto11g1466 11 13906206 13908910 ECH